==43378== Memcheck, a memory error detector ==43378== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43378== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43378== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCellProperties -malloc_debug -malloc_dump -memory_info ==43378== Parent PID: 24071 ==43378== ==43378== ==43378== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43378== Open file descriptor 12: ==43378== at 0x882107D: pipe (pipe.c:29) ==43378== by 0x1432407D: ??? ==43378== by 0xEE1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43378== by 0x9F1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43378== by 0x9EB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43378== by 0x8BACD38: PetscInitialize (pinit.c:924) ==43378== by 0x844F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43378== by 0x844F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43378== by 0x11C95A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43378== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43378== by 0x11A450: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43378== by 0x11A2F0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43378== by 0x11A987: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43378== by 0x115CD5: main (TestCellProperties.cpp:19) ==43378== ==43378== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43378== at 0x8825A1C: __open_nocancel (open64_nocancel.c:39) ==43378== by 0x87A9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43378== by 0x8489822: ??? ==43378== by 0x848996F: ??? ==43378== by 0xEEC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43378== by 0xEEC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43378== by 0xEE7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43378== by 0xEE1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43378== by 0x9F1C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43378== by 0x9EB5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43378== by 0x8BACD38: PetscInitialize (pinit.c:924) ==43378== by 0x844F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43378== by 0x844F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43378== by 0x11C95A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43378== by 0x1178AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43378== by 0x11A450: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43378== by 0x11A2F0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43378== by 0x11A987: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43378== by 0x115CD5: main (TestCellProperties.cpp:19) ==43378== ==43378== Open file descriptor 113: ==43378== ==43378== ==43378== Open file descriptor 110: ==43378== ==43378== ==43378== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellProperties_valgrind.txt ==43378== ==43378== ==43378== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43378== ==43378== ==43378== ==43378== HEAP SUMMARY: ==43378== in use at exit: 618,265 bytes in 8,234 blocks ==43378== total heap usage: 1,086,636 allocs, 1,078,402 frees, 1,460,646,985 bytes allocated ==43378== ==43378== LEAK SUMMARY: ==43378== definitely lost: 0 bytes in 0 blocks ==43378== indirectly lost: 0 bytes in 0 blocks ==43378== possibly lost: 0 bytes in 0 blocks ==43378== still reachable: 24 bytes in 2 blocks ==43378== suppressed: 618,241 bytes in 8,232 blocks ==43378== Reachable blocks (those to which a pointer was found) are not shown. ==43378== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43378== ==43378== For lists of detected and suppressed errors, rerun with: -s ==43378== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)