==25412== Memcheck, a memory error detector ==25412== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25412== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25412== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25412== Parent PID: 24071 ==25412== ==25412== ==25412== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25412== Open file descriptor 12: ==25412== at 0xED0E07D: pipe (pipe.c:29) ==25412== by 0x196AC07D: ??? ==25412== by 0x13C004CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25412== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25412== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25412== by 0xD5CAD38: PetscInitialize (pinit.c:924) ==25412== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25412== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25412== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25412== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25412== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25412== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25412== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25412== by 0x1222F5: main (TestCell.cpp:19) ==25412== ==25412== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25412== at 0xED12A1C: __open_nocancel (open64_nocancel.c:39) ==25412== by 0xEC96BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25412== by 0xE859822: ??? ==25412== by 0xE85996F: ??? ==25412== by 0x13CA56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25412== by 0x13CA5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25412== by 0x13C5B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25412== by 0x13C002DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25412== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25412== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25412== by 0xD5CAD38: PetscInitialize (pinit.c:924) ==25412== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25412== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25412== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25412== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25412== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25412== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25412== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25412== by 0x1222F5: main (TestCell.cpp:19) ==25412== ==25412== Open file descriptor 113: ==25412== ==25412== ==25412== Open file descriptor 110: ==25412== ==25412== ==25412== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25412== ==25412== ==25412== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25412== ==25412== ==25412== ==25412== HEAP SUMMARY: ==25412== in use at exit: 618,409 bytes in 8,236 blocks ==25412== total heap usage: 5,183,518 allocs, 5,175,282 frees, 1,819,191,114 bytes allocated ==25412== ==25412== LEAK SUMMARY: ==25412== definitely lost: 0 bytes in 0 blocks ==25412== indirectly lost: 0 bytes in 0 blocks ==25412== possibly lost: 0 bytes in 0 blocks ==25412== still reachable: 184 bytes in 4 blocks ==25412== suppressed: 618,225 bytes in 8,232 blocks ==25412== Reachable blocks (those to which a pointer was found) are not shown. ==25412== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25412== ==25412== For lists of detected and suppressed errors, rerun with: -s ==25412== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)