==42543== Memcheck, a memory error detector ==42543== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42543== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42543== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==42543== Parent PID: 24037 ==42543== ==42543== ==42543== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42543== Open file descriptor 12: ==42543== at 0x9C6507D: pipe (pipe.c:29) ==42543== by 0x1432407D: ??? ==42543== by 0xEE1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42543== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42543== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42543== by 0x8505D38: PetscInitialize (pinit.c:924) ==42543== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42543== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42543== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42543== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42543== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42543== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42543== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42543== by 0x114C35: main (TestRushLarsen.cpp:18) ==42543== ==42543== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42543== at 0x9C69A1C: __open_nocancel (open64_nocancel.c:39) ==42543== by 0x9BEDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42543== by 0x9794822: ??? ==42543== by 0x979496F: ??? ==42543== by 0xEEC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42543== by 0xEEC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42543== by 0xEE7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42543== by 0xEE1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42543== by 0x9898418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42543== by 0x9831D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42543== by 0x8505D38: PetscInitialize (pinit.c:924) ==42543== by 0x83DC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42543== by 0x83DC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42543== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42543== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42543== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42543== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42543== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42543== by 0x114C35: main (TestRushLarsen.cpp:18) ==42543== ==42543== Open file descriptor 113: ==42543== ==42543== ==42543== Open file descriptor 110: ==42543== ==42543== ==42543== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==42543== ==42543== ==42543== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42543== ==42543== ==42543== ==42543== HEAP SUMMARY: ==42543== in use at exit: 621,814 bytes in 8,242 blocks ==42543== total heap usage: 1,051,895 allocs, 1,043,653 frees, 1,778,851,600 bytes allocated ==42543== ==42543== LEAK SUMMARY: ==42543== definitely lost: 0 bytes in 0 blocks ==42543== indirectly lost: 0 bytes in 0 blocks ==42543== possibly lost: 0 bytes in 0 blocks ==42543== still reachable: 3,575 bytes in 10 blocks ==42543== suppressed: 618,239 bytes in 8,232 blocks ==42543== Reachable blocks (those to which a pointer was found) are not shown. ==42543== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42543== ==42543== For lists of detected and suppressed errors, rerun with: -s ==42543== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)