==26047== Memcheck, a memory error detector ==26047== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26047== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26047== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==26047== Parent PID: 24062 ==26047== ==26047== ==26047== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26047== Open file descriptor 12: ==26047== at 0xF7F907D: pipe (pipe.c:29) ==26047== by 0x196AD07D: ??? ==26047== by 0x14CB34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26047== by 0x11499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26047== by 0x11432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26047== by 0x10127D38: PetscInitialize (pinit.c:924) ==26047== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26047== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26047== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26047== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26047== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26047== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26047== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26047== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==26047== ==26047== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26047== at 0xF7FDA1C: __open_nocancel (open64_nocancel.c:39) ==26047== by 0xF781BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26047== by 0xF137822: ??? ==26047== by 0xF13796F: ??? ==26047== by 0x14D586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26047== by 0x14D58938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26047== by 0x14D0E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26047== by 0x14CB32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26047== by 0x11499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26047== by 0x11432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26047== by 0x10127D38: PetscInitialize (pinit.c:924) ==26047== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26047== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26047== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26047== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26047== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26047== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26047== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26047== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==26047== ==26047== Open file descriptor 113: ==26047== ==26047== ==26047== Open file descriptor 110: ==26047== ==26047== ==26047== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==26047== ==26047== ==26047== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26047== ==26047== ==26047== ==26047== HEAP SUMMARY: ==26047== in use at exit: 618,346 bytes in 8,239 blocks ==26047== total heap usage: 418,857 allocs, 410,618 frees, 1,353,657,767 bytes allocated ==26047== ==26047== LEAK SUMMARY: ==26047== definitely lost: 0 bytes in 0 blocks ==26047== indirectly lost: 0 bytes in 0 blocks ==26047== possibly lost: 0 bytes in 0 blocks ==26047== still reachable: 56 bytes in 3 blocks ==26047== suppressed: 618,290 bytes in 8,236 blocks ==26047== Reachable blocks (those to which a pointer was found) are not shown. ==26047== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26047== ==26047== For lists of detected and suppressed errors, rerun with: -s ==26047== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)