==25470== Memcheck, a memory error detector ==25470== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25470== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25470== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==25470== Parent PID: 24041 ==25470== ==25470== ==25470== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25470== Open file descriptor 12: ==25470== at 0xED5007D: pipe (pipe.c:29) ==25470== by 0x196AC07D: ??? ==25470== by 0x13C004CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25470== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25470== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25470== by 0xD62FD38: PetscInitialize (pinit.c:924) ==25470== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25470== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25470== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25470== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25470== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25470== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25470== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25470== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25470== ==25470== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25470== at 0xED54A1C: __open_nocancel (open64_nocancel.c:39) ==25470== by 0xECD8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25470== by 0xD4DA822: ??? ==25470== by 0xD4DA96F: ??? ==25470== by 0x13CA56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25470== by 0x13CA5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25470== by 0x13C5B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25470== by 0x13C002DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25470== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25470== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25470== by 0xD62FD38: PetscInitialize (pinit.c:924) ==25470== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25470== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25470== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25470== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25470== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25470== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25470== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25470== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==25470== ==25470== Open file descriptor 113: ==25470== ==25470== ==25470== Open file descriptor 110: ==25470== ==25470== ==25470== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==25470== ==25470== ==25470== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25470== ==25470== ==25470== ==25470== HEAP SUMMARY: ==25470== in use at exit: 618,370 bytes in 8,240 blocks ==25470== total heap usage: 57,245 allocs, 49,005 frees, 1,339,479,624 bytes allocated ==25470== ==25470== LEAK SUMMARY: ==25470== definitely lost: 0 bytes in 0 blocks ==25470== indirectly lost: 0 bytes in 0 blocks ==25470== possibly lost: 0 bytes in 0 blocks ==25470== still reachable: 72 bytes in 4 blocks ==25470== suppressed: 618,298 bytes in 8,236 blocks ==25470== Reachable blocks (those to which a pointer was found) are not shown. ==25470== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25470== ==25470== For lists of detected and suppressed errors, rerun with: -s ==25470== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)