==26221== Memcheck, a memory error detector ==26221== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26221== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26221== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==26221== Parent PID: 23997 ==26221== ==26221== ==26221== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26221== Open file descriptor 12: ==26221== at 0xF7F907D: pipe (pipe.c:29) ==26221== by 0x196AD07D: ??? ==26221== by 0x14CB34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26221== by 0x11499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26221== by 0x11432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26221== by 0x10127D38: PetscInitialize (pinit.c:924) ==26221== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26221== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26221== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26221== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26221== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26221== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26221== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26221== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26221== ==26221== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26221== at 0xF7FDA1C: __open_nocancel (open64_nocancel.c:39) ==26221== by 0xF781BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26221== by 0xF137822: ??? ==26221== by 0xF13796F: ??? ==26221== by 0x14D586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26221== by 0x14D58938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26221== by 0x14D0E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26221== by 0x14CB32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26221== by 0x11499418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26221== by 0x11432D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26221== by 0x10127D38: PetscInitialize (pinit.c:924) ==26221== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26221== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26221== by 0x1221C2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26221== by 0x11D90D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26221== by 0x11FCFC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26221== by 0x11FB9C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26221== by 0x120233: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26221== by 0x11BD35: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==26221== ==26221== Open file descriptor 113: ==26221== ==26221== ==26221== Open file descriptor 110: ==26221== ==26221== ==26221== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==26221== ==26221== ==26221== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26221== ==26221== ==26221== ==26221== HEAP SUMMARY: ==26221== in use at exit: 618,354 bytes in 8,239 blocks ==26221== total heap usage: 1,124,534 allocs, 1,116,295 frees, 1,415,928,314 bytes allocated ==26221== ==26221== LEAK SUMMARY: ==26221== definitely lost: 0 bytes in 0 blocks ==26221== indirectly lost: 0 bytes in 0 blocks ==26221== possibly lost: 0 bytes in 0 blocks ==26221== still reachable: 56 bytes in 3 blocks ==26221== suppressed: 618,298 bytes in 8,236 blocks ==26221== Reachable blocks (those to which a pointer was found) are not shown. ==26221== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26221== ==26221== For lists of detected and suppressed errors, rerun with: -s ==26221== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)