==25516== Memcheck, a memory error detector ==25516== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25516== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25516== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdeSolver -malloc_debug -malloc_dump -memory_info ==25516== Parent PID: 24013 ==25516== ==25516== ==25516== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25516== Open file descriptor 12: ==25516== at 0x1108C07D: pipe (pipe.c:29) ==25516== by 0x196AC07D: ??? ==25516== by 0x14CB44CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25516== by 0x11580418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25516== by 0x11519D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25516== by 0xF651D38: PetscInitialize (pinit.c:924) ==25516== by 0xF5281D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25516== by 0xF528227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25516== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25516== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25516== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25516== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25516== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25516== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==25516== ==25516== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25516== at 0x11090A1C: __open_nocancel (open64_nocancel.c:39) ==25516== by 0x11014BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25516== by 0x108E1822: ??? ==25516== by 0x108E196F: ??? ==25516== by 0x14D596DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25516== by 0x14D59938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25516== by 0x14D0F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25516== by 0x14CB42DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25516== by 0x11580418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25516== by 0x11519D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25516== by 0xF651D38: PetscInitialize (pinit.c:924) ==25516== by 0xF5281D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25516== by 0xF528227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25516== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25516== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25516== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25516== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25516== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25516== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==25516== ==25516== Open file descriptor 113: ==25516== ==25516== ==25516== Open file descriptor 110: ==25516== ==25516== ==25516== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdeSolver_valgrind.txt ==25516== ==25516== ==25516== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25516== ==25516== ==25516== ==25516== HEAP SUMMARY: ==25516== in use at exit: 618,318 bytes in 8,238 blocks ==25516== total heap usage: 55,378 allocs, 47,140 frees, 1,339,445,560 bytes allocated ==25516== ==25516== LEAK SUMMARY: ==25516== definitely lost: 0 bytes in 0 blocks ==25516== indirectly lost: 0 bytes in 0 blocks ==25516== possibly lost: 0 bytes in 0 blocks ==25516== still reachable: 24 bytes in 2 blocks ==25516== suppressed: 618,294 bytes in 8,236 blocks ==25516== Reachable blocks (those to which a pointer was found) are not shown. ==25516== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25516== ==25516== For lists of detected and suppressed errors, rerun with: -s ==25516== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)