==41249== Memcheck, a memory error detector ==41249== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41249== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41249== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==41249== Parent PID: 24014 ==41249== ==41249== ==41249== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41249== Open file descriptor 12: ==41249== at 0xA98907D: pipe (pipe.c:29) ==41249== by 0x1432407D: ??? ==41249== by 0xD95E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41249== by 0xA277418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41249== by 0xA210D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41249== by 0xAD14D38: PetscInitialize (pinit.c:924) ==41249== by 0xA1391D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41249== by 0xA139227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41249== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41249== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41249== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41249== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41249== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41249== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41249== ==41249== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41249== at 0xA98DA1C: __open_nocancel (open64_nocancel.c:39) ==41249== by 0xA911BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41249== by 0xA174822: ??? ==41249== by 0xA17496F: ??? ==41249== by 0xDA036DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41249== by 0xDA03938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41249== by 0xD9B9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41249== by 0xD95E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41249== by 0xA277418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41249== by 0xA210D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41249== by 0xAD14D38: PetscInitialize (pinit.c:924) ==41249== by 0xA1391D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41249== by 0xA139227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41249== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41249== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41249== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41249== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41249== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41249== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==41249== ==41249== Open file descriptor 113: ==41249== ==41249== ==41249== Open file descriptor 110: ==41249== ==41249== ==41249== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==41249== ==41249== ==41249== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41249== ==41249== ==41249== ==41249== HEAP SUMMARY: ==41249== in use at exit: 618,743 bytes in 8,244 blocks ==41249== total heap usage: 2,372,930 allocs, 2,364,686 frees, 2,468,286,269 bytes allocated ==41249== ==41249== LEAK SUMMARY: ==41249== definitely lost: 0 bytes in 0 blocks ==41249== indirectly lost: 0 bytes in 0 blocks ==41249== possibly lost: 0 bytes in 0 blocks ==41249== still reachable: 24 bytes in 2 blocks ==41249== suppressed: 618,719 bytes in 8,242 blocks ==41249== Reachable blocks (those to which a pointer was found) are not shown. ==41249== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41249== ==41249== For lists of detected and suppressed errors, rerun with: -s ==41249== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 31)