==43588== Memcheck, a memory error detector ==43588== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43588== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43588== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestSpiralWaveAndPhase -malloc_debug -malloc_dump -memory_info ==43588== Parent PID: 24014 ==43588== ==43588== ==43588== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43588== Open file descriptor 12: ==43588== at 0x84CB07D: pipe (pipe.c:29) ==43588== by 0x104D507D: ??? ==43588== by 0xC36C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43588== by 0x8B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43588== by 0x8AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43588== by 0x6A90D38: PetscInitialize (pinit.c:924) ==43588== by 0x69671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43588== by 0x6967227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43588== by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43588== by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43588== by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43588== by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43588== by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43588== by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18) ==43588== ==43588== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43588== at 0x84CFA1C: __open_nocancel (open64_nocancel.c:39) ==43588== by 0x8453BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43588== by 0x7D20822: ??? ==43588== by 0x7D2096F: ??? ==43588== by 0xC4116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43588== by 0xC411938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43588== by 0xC3C7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43588== by 0xC36C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43588== by 0x8B4E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43588== by 0x8AE7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43588== by 0x6A90D38: PetscInitialize (pinit.c:924) ==43588== by 0x69671D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43588== by 0x6967227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43588== by 0x119000: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43588== by 0x1147B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43588== by 0x116FAC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43588== by 0x116EA7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43588== by 0x1174BB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43588== by 0x112FB5: main (TestSpiralWaveAndPhase.cpp:18) ==43588== ==43588== Open file descriptor 113: ==43588== ==43588== ==43588== Open file descriptor 110: ==43588== ==43588== ==43588== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSpiralWaveAndPhase_valgrind.txt ==43588== ==43588== ==43588== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43588== ==43588== ==43588== ==43588== HEAP SUMMARY: ==43588== in use at exit: 618,663 bytes in 8,244 blocks ==43588== total heap usage: 4,351,541 allocs, 4,343,297 frees, 1,902,290,860 bytes allocated ==43588== ==43588== LEAK SUMMARY: ==43588== definitely lost: 0 bytes in 0 blocks ==43588== indirectly lost: 0 bytes in 0 blocks ==43588== possibly lost: 0 bytes in 0 blocks ==43588== still reachable: 24 bytes in 2 blocks ==43588== suppressed: 618,639 bytes in 8,242 blocks ==43588== Reachable blocks (those to which a pointer was found) are not shown. ==43588== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43588== ==43588== For lists of detected and suppressed errors, rerun with: -s ==43588== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 31)