==40010== Memcheck, a memory error detector ==40010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40010== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningContactInhibitionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==40010== Parent PID: 24077 ==40010== ==40010== ==40010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40010== Open file descriptor 12: ==40010== at 0x10D9707D: pipe (pipe.c:29) ==40010== by 0x196AD07D: ??? ==40010== by 0x14C134CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40010== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0xF225D38: PetscInitialize (pinit.c:924) ==40010== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40010== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40010== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40010== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40010== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40010== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40010== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40010== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40010== ==40010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40010== at 0x10D9BA1C: __open_nocancel (open64_nocancel.c:39) ==40010== by 0x10D1FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40010== by 0x104B5822: ??? ==40010== by 0x104B596F: ??? ==40010== by 0x14CB86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14CB8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14C6E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40010== by 0x14C132DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40010== by 0x105B8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0x10551D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40010== by 0xF225D38: PetscInitialize (pinit.c:924) ==40010== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40010== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40010== by 0x128209: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40010== by 0x123673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40010== by 0x1259CE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40010== by 0x1258CA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40010== by 0x125EDD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40010== by 0x121E75: main (TestRunningContactInhibitionSimulationsTutorial.cpp:18) ==40010== ==40010== Open file descriptor 113: ==40010== ==40010== ==40010== Open file descriptor 110: ==40010== ==40010== ==40010== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningContactInhibitionSimulationsTutorial_valgrind.txt ==40010== ==40010== ==40010== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40010== ==40010== ==40010== ==40010== HEAP SUMMARY: ==40010== in use at exit: 618,279 bytes in 8,235 blocks ==40010== total heap usage: 11,072,727 allocs, 11,064,492 frees, 4,765,711,001 bytes allocated ==40010== ==40010== LEAK SUMMARY: ==40010== definitely lost: 0 bytes in 0 blocks ==40010== indirectly lost: 0 bytes in 0 blocks ==40010== possibly lost: 0 bytes in 0 blocks ==40010== still reachable: 56 bytes in 3 blocks ==40010== suppressed: 618,223 bytes in 8,232 blocks ==40010== Reachable blocks (those to which a pointer was found) are not shown. ==40010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40010== ==40010== For lists of detected and suppressed errors, rerun with: -s ==40010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)