==26547== Memcheck, a memory error detector ==26547== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26547== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26547== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==26547== Parent PID: 24033 ==26547== ==26547== ==26547== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26547== Open file descriptor 12: ==26547== at 0xF8E007D: pipe (pipe.c:29) ==26547== by 0x196AD07D: ??? ==26547== by 0x14CB34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26547== by 0x11580418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26547== by 0x11519D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26547== by 0x10210D38: PetscInitialize (pinit.c:924) ==26547== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26547== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26547== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26547== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26547== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26547== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26547== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26547== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26547== ==26547== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26547== at 0xF8E4A1C: __open_nocancel (open64_nocancel.c:39) ==26547== by 0xF868BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26547== by 0xF137822: ??? ==26547== by 0xF13796F: ??? ==26547== by 0x14D586DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26547== by 0x14D58938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26547== by 0x14D0E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26547== by 0x14CB32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26547== by 0x11580418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26547== by 0x11519D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26547== by 0x10210D38: PetscInitialize (pinit.c:924) ==26547== by 0xF0FC1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26547== by 0xF0FC227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26547== by 0x1241FE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26547== by 0x11F593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26547== by 0x121AD8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26547== by 0x1219D3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26547== by 0x121FE7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26547== by 0x11DD95: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==26547== ==26547== Open file descriptor 113: ==26547== ==26547== ==26547== Open file descriptor 110: ==26547== ==26547== ==26547== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==26547== ==26547== ==26547== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26547== ==26547== ==26547== ==26547== HEAP SUMMARY: ==26547== in use at exit: 618,279 bytes in 8,235 blocks ==26547== total heap usage: 3,593,545 allocs, 3,585,310 frees, 4,478,245,985 bytes allocated ==26547== ==26547== LEAK SUMMARY: ==26547== definitely lost: 0 bytes in 0 blocks ==26547== indirectly lost: 0 bytes in 0 blocks ==26547== possibly lost: 0 bytes in 0 blocks ==26547== still reachable: 56 bytes in 3 blocks ==26547== suppressed: 618,223 bytes in 8,232 blocks ==26547== Reachable blocks (those to which a pointer was found) are not shown. ==26547== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26547== ==26547== For lists of detected and suppressed errors, rerun with: -s ==26547== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 32 from 32)