==41402== Memcheck, a memory error detector ==41402== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41402== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41402== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==41402== Parent PID: 23981 ==41402== ==41402== ==41402== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41402== Open file descriptor 12: ==41402== at 0xC0F307D: pipe (pipe.c:29) ==41402== by 0x1432F07D: ??? ==41402== by 0xFAE94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41402== by 0xB9E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41402== by 0xB97AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41402== by 0xA671D38: PetscInitialize (pinit.c:924) ==41402== by 0xA4E11D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41402== by 0xA4E1227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41402== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41402== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41402== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41402== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41402== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41402== by 0x138285: main (TestBidomainProblem.cpp:19) ==41402== ==41402== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41402== at 0xC0F7A1C: __open_nocancel (open64_nocancel.c:39) ==41402== by 0xC07BBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41402== by 0xA51C822: ??? ==41402== by 0xA51C96F: ??? ==41402== by 0xFB8E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41402== by 0xFB8E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41402== by 0xFB44922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41402== by 0xFAE92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41402== by 0xB9E1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41402== by 0xB97AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41402== by 0xA671D38: PetscInitialize (pinit.c:924) ==41402== by 0xA4E11D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41402== by 0xA4E1227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41402== by 0x140846: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41402== by 0x139FFD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41402== by 0x13D6D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41402== by 0x13D578: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41402== by 0x13DC0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41402== by 0x138285: main (TestBidomainProblem.cpp:19) ==41402== ==41402== Open file descriptor 115: ==41402== ==41402== ==41402== Open file descriptor 112: ==41402== ==41402== ==41402== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==41402== ==41402== ==41402== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41402== ==41402== ==41402== ==41402== HEAP SUMMARY: ==41402== in use at exit: 618,818 bytes in 8,248 blocks ==41402== total heap usage: 584,919 allocs, 576,671 frees, 1,548,984,067 bytes allocated ==41402== ==41402== LEAK SUMMARY: ==41402== definitely lost: 0 bytes in 0 blocks ==41402== indirectly lost: 0 bytes in 0 blocks ==41402== possibly lost: 0 bytes in 0 blocks ==41402== still reachable: 24 bytes in 2 blocks ==41402== suppressed: 618,794 bytes in 8,246 blocks ==41402== Reachable blocks (those to which a pointer was found) are not shown. ==41402== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41402== ==41402== For lists of detected and suppressed errors, rerun with: -s ==41402== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 103 from 38)