==41991== Memcheck, a memory error detector ==41991== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41991== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41991== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41991== Parent PID: 24061 ==41991== ==41991== ==41991== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41991== Open file descriptor 12: ==41991== at 0x856F07D: pipe (pipe.c:29) ==41991== by 0x1432F07D: ??? ==41991== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41991== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41991== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41991== by 0x88FAD38: PetscInitialize (pinit.c:924) ==41991== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41991== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41991== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41991== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41991== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41991== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41991== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41991== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41991== ==41991== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41991== at 0x8573A1C: __open_nocancel (open64_nocancel.c:39) ==41991== by 0x84F7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41991== by 0x81D6822: ??? ==41991== by 0x81D696F: ??? ==41991== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41991== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41991== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41991== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41991== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41991== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41991== by 0x88FAD38: PetscInitialize (pinit.c:924) ==41991== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41991== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41991== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41991== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41991== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41991== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41991== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41991== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41991== ==41991== Open file descriptor 116: ==41991== ==41991== ==41991== Open file descriptor 113: ==41991== ==41991== ==41991== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41991== ==41991== ==41991== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41991== ==41991== ==41991== ==41991== HEAP SUMMARY: ==41991== in use at exit: 618,338 bytes in 8,238 blocks ==41991== total heap usage: 49,005 allocs, 40,767 frees, 1,338,535,321 bytes allocated ==41991== ==41991== LEAK SUMMARY: ==41991== definitely lost: 0 bytes in 0 blocks ==41991== indirectly lost: 0 bytes in 0 blocks ==41991== possibly lost: 0 bytes in 0 blocks ==41991== still reachable: 24 bytes in 2 blocks ==41991== suppressed: 618,314 bytes in 8,236 blocks ==41991== Reachable blocks (those to which a pointer was found) are not shown. ==41991== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41991== ==41991== For lists of detected and suppressed errors, rerun with: -s ==41991== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)