==25968== Memcheck, a memory error detector ==25968== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25968== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25968== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellwiseDataGradient -malloc_debug -malloc_dump -memory_info ==25968== Parent PID: 24069 ==25968== ==25968== ==25968== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25968== Open file descriptor 12: ==25968== at 0xF80107D: pipe (pipe.c:29) ==25968== by 0x196B407D: ??? ==25968== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25968== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25968== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25968== by 0x1012FD38: PetscInitialize (pinit.c:924) ==25968== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25968== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25968== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25968== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25968== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25968== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25968== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25968== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25968== ==25968== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25968== at 0xF805A1C: __open_nocancel (open64_nocancel.c:39) ==25968== by 0xF789BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25968== by 0xF13F822: ??? ==25968== by 0xF13F96F: ??? ==25968== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25968== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25968== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25968== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25968== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25968== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25968== by 0x1012FD38: PetscInitialize (pinit.c:924) ==25968== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25968== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25968== by 0x11DD52: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25968== by 0x119493: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25968== by 0x11B86C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25968== by 0x11B767: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25968== by 0x11BD7B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25968== by 0x117C95: main (TestCellwiseDataGradient.cpp:18) ==25968== ==25968== Open file descriptor 115: ==25968== ==25968== ==25968== Open file descriptor 112: ==25968== ==25968== ==25968== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellwiseDataGradient_valgrind.txt ==25968== ==25968== ==25968== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25968== ==25968== ==25968== ==25968== HEAP SUMMARY: ==25968== in use at exit: 618,354 bytes in 8,239 blocks ==25968== total heap usage: 418,857 allocs, 410,618 frees, 1,353,657,625 bytes allocated ==25968== ==25968== LEAK SUMMARY: ==25968== definitely lost: 0 bytes in 0 blocks ==25968== indirectly lost: 0 bytes in 0 blocks ==25968== possibly lost: 0 bytes in 0 blocks ==25968== still reachable: 56 bytes in 3 blocks ==25968== suppressed: 618,298 bytes in 8,236 blocks ==25968== Reachable blocks (those to which a pointer was found) are not shown. ==25968== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25968== ==25968== For lists of detected and suppressed errors, rerun with: -s ==25968== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)