==41163== Memcheck, a memory error detector ==41163== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41163== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41163== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayGenerator -malloc_debug -malloc_dump -memory_info ==41163== Parent PID: 24069 ==41163== ==41163== ==41163== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41163== Open file descriptor 12: ==41163== at 0x6BD107D: pipe (pipe.c:29) ==41163== by 0x107AC07D: ??? ==41163== by 0xBAD14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41163== by 0x5ED6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41163== by 0x5E6FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41163== by 0x4B43D38: PetscInitialize (pinit.c:924) ==41163== by 0x4A181D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41163== by 0x4A18227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41163== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41163== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41163== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41163== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41163== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41163== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41163== ==41163== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41163== at 0x6BD5A1C: __open_nocancel (open64_nocancel.c:39) ==41163== by 0x6B59BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41163== by 0x5DD3822: ??? ==41163== by 0x5DD396F: ??? ==41163== by 0xBB766DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41163== by 0xBB76938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41163== by 0xBB2C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41163== by 0xBAD12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41163== by 0x5ED6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41163== by 0x5E6FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41163== by 0x4B43D38: PetscInitialize (pinit.c:924) ==41163== by 0x4A181D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41163== by 0x4A18227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41163== by 0x11872F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41163== by 0x11390D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41163== by 0x1166E8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41163== by 0x116588: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41163== by 0x116C1F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41163== by 0x111D35: main (TestAirwayGenerator.cpp:19) ==41163== ==41163== Open file descriptor 115: ==41163== ==41163== ==41163== Open file descriptor 112: ==41163== ==41163== ==41163== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayGenerator_valgrind.txt ==41163== ==41163== ==41163== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41163== ==41163== ==41163== ==41163== HEAP SUMMARY: ==41163== in use at exit: 618,314 bytes in 8,238 blocks ==41163== total heap usage: 627,251 allocs, 619,013 frees, 1,787,062,590 bytes allocated ==41163== ==41163== LEAK SUMMARY: ==41163== definitely lost: 0 bytes in 0 blocks ==41163== indirectly lost: 0 bytes in 0 blocks ==41163== possibly lost: 0 bytes in 0 blocks ==41163== still reachable: 24 bytes in 2 blocks ==41163== suppressed: 618,290 bytes in 8,236 blocks ==41163== Reachable blocks (those to which a pointer was found) are not shown. ==41163== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41163== ==41163== For lists of detected and suppressed errors, rerun with: -s ==41163== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)