==39808== Memcheck, a memory error detector ==39808== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39808== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39808== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==39808== Parent PID: 24033 ==39808== ==39808== ==39808== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39808== Open file descriptor 12: ==39808== at 0x10DE107D: pipe (pipe.c:29) ==39808== by 0x196B407D: ??? ==39808== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39808== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39808== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39808== by 0xF292D38: PetscInitialize (pinit.c:924) ==39808== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39808== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39808== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39808== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39808== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39808== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39808== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39808== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39808== ==39808== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39808== at 0x10DE5A1C: __open_nocancel (open64_nocancel.c:39) ==39808== by 0x10D69BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39808== by 0xF13F822: ??? ==39808== by 0xF13F96F: ??? ==39808== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39808== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39808== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39808== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39808== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39808== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39808== by 0xF292D38: PetscInitialize (pinit.c:924) ==39808== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39808== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39808== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39808== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39808== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39808== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39808== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39808== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39808== ==39808== Open file descriptor 115: ==39808== ==39808== ==39808== Open file descriptor 112: ==39808== ==39808== ==39808== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==39808== ==39808== ==39808== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39808== ==39808== ==39808== ==39808== HEAP SUMMARY: ==39808== in use at exit: 618,281 bytes in 8,235 blocks ==39808== total heap usage: 8,976,909 allocs, 8,968,674 frees, 2,183,736,234 bytes allocated ==39808== ==39808== LEAK SUMMARY: ==39808== definitely lost: 0 bytes in 0 blocks ==39808== indirectly lost: 0 bytes in 0 blocks ==39808== possibly lost: 0 bytes in 0 blocks ==39808== still reachable: 56 bytes in 3 blocks ==39808== suppressed: 618,225 bytes in 8,232 blocks ==39808== Reachable blocks (those to which a pointer was found) are not shown. ==39808== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39808== ==39808== For lists of detected and suppressed errors, rerun with: -s ==39808== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)