==25867== Memcheck, a memory error detector ==25867== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25867== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25867== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==25867== Parent PID: 24033 ==25867== ==25867== ==25867== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25867== Open file descriptor 12: ==25867== at 0xEF9407D: pipe (pipe.c:29) ==25867== by 0x196B507D: ??? ==25867== by 0x13C594CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25867== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25867== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25867== by 0xD871D38: PetscInitialize (pinit.c:924) ==25867== by 0xD6E31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25867== by 0xD6E3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25867== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25867== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25867== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25867== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25867== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25867== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25867== ==25867== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25867== at 0xEF98A1C: __open_nocancel (open64_nocancel.c:39) ==25867== by 0xEF1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25867== by 0xD71E822: ??? ==25867== by 0xD71E96F: ??? ==25867== by 0x13CFE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25867== by 0x13CFE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25867== by 0x13CB4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25867== by 0x13C592DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25867== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25867== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25867== by 0xD871D38: PetscInitialize (pinit.c:924) ==25867== by 0xD6E31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25867== by 0xD6E3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25867== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25867== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25867== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25867== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25867== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25867== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==25867== ==25867== Open file descriptor 115: ==25867== ==25867== ==25867== Open file descriptor 112: ==25867== ==25867== ==25867== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==25867== ==25867== ==25867== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25867== ==25867== ==25867== ==25867== HEAP SUMMARY: ==25867== in use at exit: 618,322 bytes in 8,238 blocks ==25867== total heap usage: 63,220 allocs, 54,982 frees, 1,339,961,902 bytes allocated ==25867== ==25867== LEAK SUMMARY: ==25867== definitely lost: 0 bytes in 0 blocks ==25867== indirectly lost: 0 bytes in 0 blocks ==25867== possibly lost: 0 bytes in 0 blocks ==25867== still reachable: 24 bytes in 2 blocks ==25867== suppressed: 618,298 bytes in 8,236 blocks ==25867== Reachable blocks (those to which a pointer was found) are not shown. ==25867== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25867== ==25867== For lists of detected and suppressed errors, rerun with: -s ==25867== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)