==25567== Memcheck, a memory error detector ==25567== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25567== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25567== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdes -malloc_debug -malloc_dump -memory_info ==25567== Parent PID: 24078 ==25567== ==25567== ==25567== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25567== Open file descriptor 12: ==25567== at 0x10CFA07D: pipe (pipe.c:29) ==25567== by 0x196B407D: ??? ==25567== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25567== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25567== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25567== by 0xF292D38: PetscInitialize (pinit.c:924) ==25567== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25567== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25567== by 0x12CAB7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25567== by 0x127CC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25567== by 0x12A3DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25567== by 0x12A2D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25567== by 0x12A8EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25567== by 0x1264C5: main (TestCellBasedEllipticPdes.cpp:18) ==25567== ==25567== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25567== at 0x10CFEA1C: __open_nocancel (open64_nocancel.c:39) ==25567== by 0x10C82BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25567== by 0xF13F822: ??? ==25567== by 0xF13F96F: ??? ==25567== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25567== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25567== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25567== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25567== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25567== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25567== by 0xF292D38: PetscInitialize (pinit.c:924) ==25567== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25567== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25567== by 0x12CAB7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25567== by 0x127CC3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25567== by 0x12A3DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25567== by 0x12A2D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25567== by 0x12A8EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25567== by 0x1264C5: main (TestCellBasedEllipticPdes.cpp:18) ==25567== ==25567== Open file descriptor 117: ==25567== ==25567== ==25567== Open file descriptor 114: ==25567== ==25567== ==25567== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdes_valgrind.txt ==25567== ==25567== ==25567== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25567== ==25567== ==25567== ==25567== HEAP SUMMARY: ==25567== in use at exit: 618,354 bytes in 8,239 blocks ==25567== total heap usage: 79,217 allocs, 70,978 frees, 1,343,928,552 bytes allocated ==25567== ==25567== LEAK SUMMARY: ==25567== definitely lost: 0 bytes in 0 blocks ==25567== indirectly lost: 0 bytes in 0 blocks ==25567== possibly lost: 0 bytes in 0 blocks ==25567== still reachable: 56 bytes in 3 blocks ==25567== suppressed: 618,298 bytes in 8,236 blocks ==25567== Reachable blocks (those to which a pointer was found) are not shown. ==25567== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25567== ==25567== For lists of detected and suppressed errors, rerun with: -s ==25567== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)