==40420== Memcheck, a memory error detector ==40420== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40420== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40420== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==40420== Parent PID: 23966 ==40420== ==40420== ==40420== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40420== Open file descriptor 12: ==40420== at 0x1110507D: pipe (pipe.c:29) ==40420== by 0x1B37D07D: ??? ==40420== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40420== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40420== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40420== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==40420== by 0x109C41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40420== by 0x109C4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40420== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40420== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40420== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40420== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40420== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40420== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40420== ==40420== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40420== at 0x11109A1C: __open_nocancel (open64_nocancel.c:39) ==40420== by 0x1108DBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40420== by 0x109FE822: ??? ==40420== by 0x109FE96F: ??? ==40420== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40420== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40420== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40420== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40420== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40420== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40420== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==40420== by 0x109C41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40420== by 0x109C4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40420== by 0x136F12: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40420== by 0x130103: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40420== by 0x132B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40420== by 0x132A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40420== by 0x133065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40420== by 0x12E905: main (TestCellBetaCateninWriter.cpp:18) ==40420== ==40420== Open file descriptor 116: ==40420== ==40420== ==40420== Open file descriptor 113: ==40420== ==40420== ==40420== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==40420== ==40420== ==40420== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40420== ==40420== ==40420== ==40420== HEAP SUMMARY: ==40420== in use at exit: 618,462 bytes in 8,240 blocks ==40420== total heap usage: 63,280 allocs, 55,040 frees, 1,341,084,087 bytes allocated ==40420== ==40420== LEAK SUMMARY: ==40420== definitely lost: 0 bytes in 0 blocks ==40420== indirectly lost: 0 bytes in 0 blocks ==40420== possibly lost: 0 bytes in 0 blocks ==40420== still reachable: 136 bytes in 4 blocks ==40420== suppressed: 618,326 bytes in 8,236 blocks ==40420== Reachable blocks (those to which a pointer was found) are not shown. ==40420== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40420== ==40420== For lists of detected and suppressed errors, rerun with: -s ==40420== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)