==42768== Memcheck, a memory error detector ==42768== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==42768== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==42768== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestRushLarsen -malloc_debug -malloc_dump -memory_info ==42768== Parent PID: 24118 ==42768== ==42768== ==42768== FILE DESCRIPTORS: 9 open (3 std) at exit. ==42768== Open file descriptor 12: ==42768== at 0x9C6807D: pipe (pipe.c:29) ==42768== by 0x1433707D: ??? ==42768== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42768== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42768== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42768== by 0x8508D38: PetscInitialize (pinit.c:924) ==42768== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42768== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42768== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42768== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42768== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42768== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42768== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42768== by 0x114C35: main (TestRushLarsen.cpp:18) ==42768== ==42768== Open file descriptor 8: /dev/shm/open_mpi.0000 ==42768== at 0x9C6CA1C: __open_nocancel (open64_nocancel.c:39) ==42768== by 0x9BF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==42768== by 0x9797822: ??? ==42768== by 0x979796F: ??? ==42768== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42768== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42768== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==42768== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==42768== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42768== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==42768== by 0x8508D38: PetscInitialize (pinit.c:924) ==42768== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==42768== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==42768== by 0x11AC45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==42768== by 0x116433: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==42768== by 0x118934: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==42768== by 0x11882F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==42768== by 0x118E43: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==42768== by 0x114C35: main (TestRushLarsen.cpp:18) ==42768== ==42768== Open file descriptor 116: ==42768== ==42768== ==42768== Open file descriptor 113: ==42768== ==42768== ==42768== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRushLarsen_valgrind.txt ==42768== ==42768== ==42768== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==42768== ==42768== ==42768== ==42768== HEAP SUMMARY: ==42768== in use at exit: 621,832 bytes in 8,242 blocks ==42768== total heap usage: 1,051,896 allocs, 1,043,654 frees, 1,778,851,895 bytes allocated ==42768== ==42768== LEAK SUMMARY: ==42768== definitely lost: 0 bytes in 0 blocks ==42768== indirectly lost: 0 bytes in 0 blocks ==42768== possibly lost: 0 bytes in 0 blocks ==42768== still reachable: 3,575 bytes in 10 blocks ==42768== suppressed: 618,257 bytes in 8,232 blocks ==42768== Reachable blocks (those to which a pointer was found) are not shown. ==42768== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==42768== ==42768== For lists of detected and suppressed errors, rerun with: -s ==42768== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 30 from 30)