==40243== Memcheck, a memory error detector ==40243== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40243== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40243== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==40243== Parent PID: 23994 ==40243== ==40243== ==40243== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40243== Open file descriptor 12: ==40243== at 0xF45E07D: pipe (pipe.c:29) ==40243== by 0x1B37D07D: ??? ==40243== by 0x165804CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40243== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40243== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40243== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==40243== by 0xED611D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40243== by 0xED61227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40243== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40243== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40243== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40243== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40243== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40243== by 0x118975: main (TestCellForCrypt.cpp:18) ==40243== ==40243== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40243== at 0xF462A1C: __open_nocancel (open64_nocancel.c:39) ==40243== by 0xF3E6BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40243== by 0xED9B822: ??? ==40243== by 0xED9B96F: ??? ==40243== by 0x166256DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40243== by 0x16625938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40243== by 0x165DB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40243== by 0x165802DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40243== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40243== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40243== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==40243== by 0xED611D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40243== by 0xED61227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40243== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40243== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40243== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40243== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40243== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40243== by 0x118975: main (TestCellForCrypt.cpp:18) ==40243== ==40243== Open file descriptor 117: ==40243== ==40243== ==40243== Open file descriptor 114: ==40243== ==40243== ==40243== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==40243== ==40243== ==40243== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40243== ==40243== ==40243== ==40243== HEAP SUMMARY: ==40243== in use at exit: 618,514 bytes in 8,240 blocks ==40243== total heap usage: 55,769 allocs, 47,529 frees, 1,339,199,444 bytes allocated ==40243== ==40243== LEAK SUMMARY: ==40243== definitely lost: 0 bytes in 0 blocks ==40243== indirectly lost: 0 bytes in 0 blocks ==40243== possibly lost: 0 bytes in 0 blocks ==40243== still reachable: 184 bytes in 4 blocks ==40243== suppressed: 618,330 bytes in 8,236 blocks ==40243== Reachable blocks (those to which a pointer was found) are not shown. ==40243== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40243== ==40243== For lists of detected and suppressed errors, rerun with: -s ==40243== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)