==39917== Memcheck, a memory error detector ==39917== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39917== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39917== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingNewCellBasedWritersTutorial -malloc_debug -malloc_dump -memory_info ==39917== Parent PID: 23994 ==39917== ==39917== ==39917== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39917== Open file descriptor 12: ==39917== at 0xF84307D: pipe (pipe.c:29) ==39917== by 0x196BC07D: ??? ==39917== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39917== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39917== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39917== by 0x1012FD38: PetscInitialize (pinit.c:924) ==39917== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39917== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39917== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39917== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39917== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39917== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39917== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39917== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==39917== ==39917== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39917== at 0xF847A1C: __open_nocancel (open64_nocancel.c:39) ==39917== by 0xF7CBBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39917== by 0xF13E822: ??? ==39917== by 0xF13E96F: ??? ==39917== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39917== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39917== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39917== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39917== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39917== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39917== by 0x1012FD38: PetscInitialize (pinit.c:924) ==39917== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39917== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39917== by 0x1B8DC8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==39917== by 0x1B2CFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39917== by 0x1B669A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39917== by 0x1B6596: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39917== by 0x1B6BA9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39917== by 0x1B14F5: main (TestCreatingAndUsingNewCellBasedWritersTutorial.cpp:18) ==39917== ==39917== Open file descriptor 117: ==39917== ==39917== ==39917== Open file descriptor 114: ==39917== ==39917== ==39917== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingNewCellBasedWritersTutorial_valgrind.txt ==39917== ==39917== ==39917== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39917== ==39917== ==39917== ==39917== HEAP SUMMARY: ==39917== in use at exit: 618,297 bytes in 8,235 blocks ==39917== total heap usage: 2,449,557 allocs, 2,441,322 frees, 1,578,043,210 bytes allocated ==39917== ==39917== LEAK SUMMARY: ==39917== definitely lost: 0 bytes in 0 blocks ==39917== indirectly lost: 0 bytes in 0 blocks ==39917== possibly lost: 0 bytes in 0 blocks ==39917== still reachable: 56 bytes in 3 blocks ==39917== suppressed: 618,241 bytes in 8,232 blocks ==39917== Reachable blocks (those to which a pointer was found) are not shown. ==39917== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39917== ==39917== For lists of detected and suppressed errors, rerun with: -s ==39917== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)