==25957== Memcheck, a memory error detector ==25957== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25957== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25957== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellWriters -malloc_debug -malloc_dump -memory_info ==25957== Parent PID: 23930 ==25957== ==25957== ==25957== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25957== Open file descriptor 12: ==25957== at 0xFB1607D: pipe (pipe.c:29) ==25957== by 0x196BD07D: ??? ==25957== by 0x14CBB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25957== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x1012FD38: PetscInitialize (pinit.c:924) ==25957== by 0xF3D51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25957== by 0xF3D5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25957== by 0x144A2A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25957== by 0x13CE5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25957== by 0x14024C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25957== by 0x1400EC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25957== by 0x140783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25957== by 0x13B285: main (TestCellWriters.cpp:19) ==25957== ==25957== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25957== at 0xFB1AA1C: __open_nocancel (open64_nocancel.c:39) ==25957== by 0xFA9EBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25957== by 0xF40F822: ??? ==25957== by 0xF40F96F: ??? ==25957== by 0x14D606DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14D60938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14D16922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25957== by 0x14CBB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25957== by 0x114A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x1143AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25957== by 0x1012FD38: PetscInitialize (pinit.c:924) ==25957== by 0xF3D51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25957== by 0xF3D5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25957== by 0x144A2A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25957== by 0x13CE5D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25957== by 0x14024C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25957== by 0x1400EC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25957== by 0x140783: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25957== by 0x13B285: main (TestCellWriters.cpp:19) ==25957== ==25957== Open file descriptor 158: ==25957== ==25957== ==25957== Open file descriptor 155: ==25957== ==25957== ==25957== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellWriters_valgrind.txt ==25957== ==25957== ==25957== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25957== ==25957== ==25957== ==25957== HEAP SUMMARY: ==25957== in use at exit: 618,370 bytes in 8,239 blocks ==25957== total heap usage: 69,809 allocs, 61,570 frees, 1,342,420,750 bytes allocated ==25957== ==25957== LEAK SUMMARY: ==25957== definitely lost: 0 bytes in 0 blocks ==25957== indirectly lost: 0 bytes in 0 blocks ==25957== possibly lost: 0 bytes in 0 blocks ==25957== still reachable: 56 bytes in 3 blocks ==25957== suppressed: 618,314 bytes in 8,236 blocks ==25957== Reachable blocks (those to which a pointer was found) are not shown. ==25957== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25957== ==25957== For lists of detected and suppressed errors, rerun with: -s ==25957== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)