==25357== Memcheck, a memory error detector ==25357== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25357== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25357== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==25357== Parent PID: 24011 ==25357== ==25357== ==25357== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25357== Open file descriptor 12: ==25357== at 0xED5507D: pipe (pipe.c:29) ==25357== by 0x1970307D: ??? ==25357== by 0x13C4F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25357== by 0xE9A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25357== by 0xE93DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25357== by 0xD611D38: PetscInitialize (pinit.c:924) ==25357== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25357== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25357== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25357== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25357== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25357== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25357== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25357== by 0x113935: main (TestCellSrn.cpp:18) ==25357== ==25357== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25357== at 0xED59A1C: __open_nocancel (open64_nocancel.c:39) ==25357== by 0xECDDBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25357== by 0xE8A0822: ??? ==25357== by 0xE8A096F: ??? ==25357== by 0x13CF46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25357== by 0x13CF4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25357== by 0x13CAA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25357== by 0x13C4F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25357== by 0xE9A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25357== by 0xE93DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25357== by 0xD611D38: PetscInitialize (pinit.c:924) ==25357== by 0xD4E61D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25357== by 0xD4E6227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25357== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25357== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25357== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25357== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25357== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25357== by 0x113935: main (TestCellSrn.cpp:18) ==25357== ==25357== Open file descriptor 158: ==25357== ==25357== ==25357== Open file descriptor 155: ==25357== ==25357== ==25357== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==25357== ==25357== ==25357== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25357== ==25357== ==25357== ==25357== HEAP SUMMARY: ==25357== in use at exit: 618,434 bytes in 8,240 blocks ==25357== total heap usage: 63,323 allocs, 55,083 frees, 1,339,388,401 bytes allocated ==25357== ==25357== LEAK SUMMARY: ==25357== definitely lost: 0 bytes in 0 blocks ==25357== indirectly lost: 0 bytes in 0 blocks ==25357== possibly lost: 0 bytes in 0 blocks ==25357== still reachable: 120 bytes in 4 blocks ==25357== suppressed: 618,314 bytes in 8,236 blocks ==25357== Reachable blocks (those to which a pointer was found) are not shown. ==25357== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25357== ==25357== For lists of detected and suppressed errors, rerun with: -s ==25357== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)