==25558== Memcheck, a memory error detector ==25558== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25558== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25558== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25558== Parent PID: 24011 ==25558== ==25558== ==25558== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25558== Open file descriptor 12: ==25558== at 0x110DE07D: pipe (pipe.c:29) ==25558== by 0x1970307D: ??? ==25558== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25558== by 0x109E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25558== by 0x1097FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25558== by 0xF676D38: PetscInitialize (pinit.c:924) ==25558== by 0xF4E81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25558== by 0xF4E8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25558== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25558== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25558== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25558== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25558== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25558== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25558== ==25558== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25558== at 0x110E2A1C: __open_nocancel (open64_nocancel.c:39) ==25558== by 0x11066BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25558== by 0xF522822: ??? ==25558== by 0xF52296F: ??? ==25558== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25558== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25558== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25558== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25558== by 0x109E6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25558== by 0x1097FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25558== by 0xF676D38: PetscInitialize (pinit.c:924) ==25558== by 0xF4E81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25558== by 0xF4E8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25558== by 0x13AB97: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25558== by 0x135563: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25558== by 0x138174: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25558== by 0x13806F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25558== by 0x138683: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25558== by 0x133D65: main (TestEllipticBoxDomainPdeModifier.cpp:18) ==25558== ==25558== Open file descriptor 158: ==25558== ==25558== ==25558== Open file descriptor 155: ==25558== ==25558== ==25558== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestEllipticBoxDomainPdeModifier_valgrind.txt ==25558== ==25558== ==25558== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25558== ==25558== ==25558== ==25558== HEAP SUMMARY: ==25558== in use at exit: 618,297 bytes in 8,235 blocks ==25558== total heap usage: 5,625,605 allocs, 5,617,370 frees, 1,932,250,231 bytes allocated ==25558== ==25558== LEAK SUMMARY: ==25558== definitely lost: 0 bytes in 0 blocks ==25558== indirectly lost: 0 bytes in 0 blocks ==25558== possibly lost: 0 bytes in 0 blocks ==25558== still reachable: 56 bytes in 3 blocks ==25558== suppressed: 618,241 bytes in 8,232 blocks ==25558== Reachable blocks (those to which a pointer was found) are not shown. ==25558== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25558== ==25558== For lists of detected and suppressed errors, rerun with: -s ==25558== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)