==25944== Memcheck, a memory error detector ==25944== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25944== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25944== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellKillers -malloc_debug -malloc_dump -memory_info ==25944== Parent PID: 23986 ==25944== ==25944== ==25944== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25944== Open file descriptor 12: ==25944== at 0x10DE107D: pipe (pipe.c:29) ==25944== by 0x196BC07D: ??? ==25944== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25944== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25944== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25944== by 0xF292D38: PetscInitialize (pinit.c:924) ==25944== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25944== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25944== by 0x1A5341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25944== by 0x19D239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25944== by 0x1A087C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25944== by 0x1A071C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25944== by 0x1A0DB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25944== by 0x19B655: main (TestCellKillers.cpp:19) ==25944== ==25944== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25944== at 0x10DE5A1C: __open_nocancel (open64_nocancel.c:39) ==25944== by 0x10D69BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25944== by 0xF13E822: ??? ==25944== by 0xF13E96F: ??? ==25944== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25944== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25944== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25944== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25944== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25944== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25944== by 0xF292D38: PetscInitialize (pinit.c:924) ==25944== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25944== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25944== by 0x1A5341: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25944== by 0x19D239: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25944== by 0x1A087C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25944== by 0x1A071C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25944== by 0x1A0DB3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25944== by 0x19B655: main (TestCellKillers.cpp:19) ==25944== ==25944== Open file descriptor 158: ==25944== ==25944== ==25944== Open file descriptor 155: ==25944== ==25944== ==25944== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellKillers_valgrind.txt ==25944== ==25944== ==25944== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25944== ==25944== ==25944== ==25944== HEAP SUMMARY: ==25944== in use at exit: 618,370 bytes in 8,239 blocks ==25944== total heap usage: 119,760 allocs, 111,521 frees, 1,344,138,723 bytes allocated ==25944== ==25944== LEAK SUMMARY: ==25944== definitely lost: 0 bytes in 0 blocks ==25944== indirectly lost: 0 bytes in 0 blocks ==25944== possibly lost: 0 bytes in 0 blocks ==25944== still reachable: 56 bytes in 3 blocks ==25944== suppressed: 618,314 bytes in 8,236 blocks ==25944== Reachable blocks (those to which a pointer was found) are not shown. ==25944== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25944== ==25944== For lists of detected and suppressed errors, rerun with: -s ==25944== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)