==40485== Memcheck, a memory error detector ==40485== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40485== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40485== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==40485== Parent PID: 23986 ==40485== ==40485== ==40485== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40485== Open file descriptor 12: ==40485== at 0x1085407D: pipe (pipe.c:29) ==40485== by 0x1B37D07D: ??? ==40485== by 0x155194CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40485== by 0x104A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40485== by 0x1043AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40485== by 0xF131D38: PetscInitialize (pinit.c:924) ==40485== by 0xEFA31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40485== by 0xEFA3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40485== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40485== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40485== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40485== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40485== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40485== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40485== ==40485== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40485== at 0x10858A1C: __open_nocancel (open64_nocancel.c:39) ==40485== by 0x107DCBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40485== by 0xEFDD822: ??? ==40485== by 0xEFDD96F: ??? ==40485== by 0x155BE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40485== by 0x155BE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40485== by 0x15574922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40485== by 0x155192DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40485== by 0x104A1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40485== by 0x1043AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40485== by 0xF131D38: PetscInitialize (pinit.c:924) ==40485== by 0xEFA31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40485== by 0xEFA3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40485== by 0x1264BD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40485== by 0x1217C3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40485== by 0x123E3A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40485== by 0x123D36: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40485== by 0x124349: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40485== by 0x11FFC5: main (TestWntCellCycleOdeSystem.cpp:18) ==40485== ==40485== Open file descriptor 158: ==40485== ==40485== ==40485== Open file descriptor 155: ==40485== ==40485== ==40485== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntCellCycleOdeSystem_valgrind.txt ==40485== ==40485== ==40485== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40485== ==40485== ==40485== ==40485== HEAP SUMMARY: ==40485== in use at exit: 618,354 bytes in 8,238 blocks ==40485== total heap usage: 185,584 allocs, 177,346 frees, 1,419,925,172 bytes allocated ==40485== ==40485== LEAK SUMMARY: ==40485== definitely lost: 0 bytes in 0 blocks ==40485== indirectly lost: 0 bytes in 0 blocks ==40485== possibly lost: 0 bytes in 0 blocks ==40485== still reachable: 24 bytes in 2 blocks ==40485== suppressed: 618,330 bytes in 8,236 blocks ==40485== Reachable blocks (those to which a pointer was found) are not shown. ==40485== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40485== ==40485== For lists of detected and suppressed errors, rerun with: -s ==40485== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)