==25534== Memcheck, a memory error detector ==25534== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25534== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25534== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==25534== Parent PID: 24122 ==25534== ==25534== ==25534== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25534== Open file descriptor 12: ==25534== at 0xED5007D: pipe (pipe.c:29) ==25534== by 0x196BD07D: ??? ==25534== by 0x13C084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25534== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25534== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25534== by 0xD62FD38: PetscInitialize (pinit.c:924) ==25534== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25534== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25534== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25534== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25534== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25534== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25534== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25534== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25534== ==25534== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25534== at 0xED54A1C: __open_nocancel (open64_nocancel.c:39) ==25534== by 0xECD8BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25534== by 0xD4D9822: ??? ==25534== by 0xD4D996F: ??? ==25534== by 0x13CAD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25534== by 0x13CAD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25534== by 0x13C63922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25534== by 0x13C082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25534== by 0xE99F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25534== by 0xE938D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25534== by 0xD62FD38: PetscInitialize (pinit.c:924) ==25534== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25534== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25534== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25534== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25534== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25534== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25534== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25534== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==25534== ==25534== Open file descriptor 158: ==25534== ==25534== ==25534== Open file descriptor 155: ==25534== ==25534== ==25534== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==25534== ==25534== ==25534== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25534== ==25534== ==25534== ==25534== HEAP SUMMARY: ==25534== in use at exit: 618,370 bytes in 8,239 blocks ==25534== total heap usage: 53,420 allocs, 45,181 frees, 1,338,995,771 bytes allocated ==25534== ==25534== LEAK SUMMARY: ==25534== definitely lost: 0 bytes in 0 blocks ==25534== indirectly lost: 0 bytes in 0 blocks ==25534== possibly lost: 0 bytes in 0 blocks ==25534== still reachable: 56 bytes in 3 blocks ==25534== suppressed: 618,314 bytes in 8,236 blocks ==25534== Reachable blocks (those to which a pointer was found) are not shown. ==25534== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25534== ==25534== For lists of detected and suppressed errors, rerun with: -s ==25534== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)