==24014== Memcheck, a memory error detector ==24014== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24014== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24014== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==24014== Parent PID: 24011 ==24014== ==24014== ==24014== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24014== Open file descriptor 12: ==24014== at 0x4CB207D: pipe (pipe.c:29) ==24014== by 0xAEAD07D: ??? ==24014== by 0x89BC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24014== by 0x626F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24014== by 0x6208D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24014== by 0x4EFFD38: PetscInitialize (pinit.c:924) ==24014== by 0x48FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24014== by 0x48FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24014== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24014== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24014== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24014== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24014== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24014== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24014== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24014== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24014== by 0x110C15: main (TestCitations.cpp:18) ==24014== ==24014== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24014== at 0x4CB6A1C: __open_nocancel (open64_nocancel.c:39) ==24014== by 0x4C3ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24014== by 0x4934822: ??? ==24014== by 0x493496F: ??? ==24014== by 0x8A616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24014== by 0x8A61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24014== by 0x8A17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24014== by 0x89BC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24014== by 0x626F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24014== by 0x6208D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24014== by 0x4EFFD38: PetscInitialize (pinit.c:924) ==24014== by 0x48FA1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24014== by 0x48FA227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24014== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==24014== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==24014== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==24014== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==24014== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==24014== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==24014== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24014== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24014== by 0x110C15: main (TestCitations.cpp:18) ==24014== ==24014== Open file descriptor 158: ==24014== ==24014== ==24014== Open file descriptor 155: ==24014== ==24014== ==24014== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==24014== ==24014== ==24014== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24014== ==24014== ==24014== ==24014== HEAP SUMMARY: ==24014== in use at exit: 617,874 bytes in 8,238 blocks ==24014== total heap usage: 45,217 allocs, 36,979 frees, 1,338,329,550 bytes allocated ==24014== ==24014== LEAK SUMMARY: ==24014== definitely lost: 0 bytes in 0 blocks ==24014== indirectly lost: 0 bytes in 0 blocks ==24014== possibly lost: 0 bytes in 0 blocks ==24014== still reachable: 24 bytes in 2 blocks ==24014== suppressed: 617,850 bytes in 8,236 blocks ==24014== Reachable blocks (those to which a pointer was found) are not shown. ==24014== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24014== ==24014== For lists of detected and suppressed errors, rerun with: -s ==24014== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)