==40100== Memcheck, a memory error detector ==40100== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40100== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40100== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==40100== Parent PID: 24081 ==40100== ==40100== ==40100== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40100== Open file descriptor 12: ==40100== at 0x10CFA07D: pipe (pipe.c:29) ==40100== by 0x196BC07D: ??? ==40100== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40100== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40100== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40100== by 0xF292D38: PetscInitialize (pinit.c:924) ==40100== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40100== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40100== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40100== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40100== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40100== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40100== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40100== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40100== ==40100== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40100== at 0x10CFEA1C: __open_nocancel (open64_nocancel.c:39) ==40100== by 0x10C82BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40100== by 0xF13E822: ??? ==40100== by 0xF13E96F: ??? ==40100== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40100== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40100== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40100== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40100== by 0x10602418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40100== by 0x1059BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40100== by 0xF292D38: PetscInitialize (pinit.c:924) ==40100== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40100== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40100== by 0x149987: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40100== by 0x1442D9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40100== by 0x146FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40100== by 0x146E72: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40100== by 0x147509: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40100== by 0x1426F5: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==40100== ==40100== Open file descriptor 158: ==40100== ==40100== ==40100== Open file descriptor 155: ==40100== ==40100== ==40100== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==40100== ==40100== ==40100== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40100== ==40100== ==40100== ==40100== HEAP SUMMARY: ==40100== in use at exit: 618,297 bytes in 8,235 blocks ==40100== total heap usage: 4,262,898 allocs, 4,254,663 frees, 1,898,477,777 bytes allocated ==40100== ==40100== LEAK SUMMARY: ==40100== definitely lost: 0 bytes in 0 blocks ==40100== indirectly lost: 0 bytes in 0 blocks ==40100== possibly lost: 0 bytes in 0 blocks ==40100== still reachable: 56 bytes in 3 blocks ==40100== suppressed: 618,241 bytes in 8,232 blocks ==40100== Reachable blocks (those to which a pointer was found) are not shown. ==40100== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40100== ==40100== For lists of detected and suppressed errors, rerun with: -s ==40100== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)