==41168== Memcheck, a memory error detector ==41168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41168== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==41168== Parent PID: 24437 ==41168== ==41168== ==41168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41168== Open file descriptor 12: ==41168== at 0x110C107D: pipe (pipe.c:29) ==41168== by 0x1B37D07D: ??? ==41168== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41168== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==41168== by 0x109C41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41168== by 0x109C4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41168== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41168== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41168== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41168== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41168== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41168== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41168== ==41168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41168== at 0x110C5A1C: __open_nocancel (open64_nocancel.c:39) ==41168== by 0x11049BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41168== by 0x109FE822: ??? ==41168== by 0x109FE96F: ??? ==41168== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41168== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41168== by 0x12E48418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x12DE1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41168== by 0x11AD8D38: PetscInitialize (pinit.c:924) ==41168== by 0x109C41D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41168== by 0x109C4227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41168== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41168== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41168== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41168== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41168== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41168== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41168== ==41168== Open file descriptor 158: ==41168== ==41168== ==41168== Open file descriptor 155: ==41168== ==41168== ==41168== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==41168== ==41168== ==41168== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41168== ==41168== ==41168== ==41168== HEAP SUMMARY: ==41168== in use at exit: 618,391 bytes in 8,236 blocks ==41168== total heap usage: 46,840,659 allocs, 46,832,423 frees, 5,592,618,394 bytes allocated ==41168== ==41168== LEAK SUMMARY: ==41168== definitely lost: 0 bytes in 0 blocks ==41168== indirectly lost: 0 bytes in 0 blocks ==41168== possibly lost: 0 bytes in 0 blocks ==41168== still reachable: 136 bytes in 4 blocks ==41168== suppressed: 618,255 bytes in 8,232 blocks ==41168== Reachable blocks (those to which a pointer was found) are not shown. ==41168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41168== ==41168== For lists of detected and suppressed errors, rerun with: -s ==41168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)