==25039== Memcheck, a memory error detector ==25039== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25039== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25039== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==25039== Parent PID: 24095 ==25039== ==25039== ==25039== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25039== Open file descriptor 12: ==25039== at 0x640707D: pipe (pipe.c:29) ==25039== by 0xB1E407D: ??? ==25039== by 0x8CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25039== by 0x603C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25039== by 0x5FD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25039== by 0x4CCCD38: PetscInitialize (pinit.c:924) ==25039== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25039== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25039== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25039== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25039== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25039== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25039== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25039== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==25039== ==25039== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25039== at 0x640BA1C: __open_nocancel (open64_nocancel.c:39) ==25039== by 0x638FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25039== by 0x4B7C822: ??? ==25039== by 0x4B7C96F: ??? ==25039== by 0x8D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25039== by 0x8D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25039== by 0x8D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25039== by 0x8CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25039== by 0x603C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25039== by 0x5FD5D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25039== by 0x4CCCD38: PetscInitialize (pinit.c:924) ==25039== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25039== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25039== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25039== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25039== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25039== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25039== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25039== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==25039== ==25039== Open file descriptor 158: ==25039== ==25039== ==25039== Open file descriptor 155: ==25039== ==25039== ==25039== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==25039== ==25039== ==25039== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25039== ==25039== ==25039== ==25039== HEAP SUMMARY: ==25039== in use at exit: 617,938 bytes in 8,238 blocks ==25039== total heap usage: 45,966 allocs, 37,728 frees, 1,338,334,260 bytes allocated ==25039== ==25039== LEAK SUMMARY: ==25039== definitely lost: 0 bytes in 0 blocks ==25039== indirectly lost: 0 bytes in 0 blocks ==25039== possibly lost: 0 bytes in 0 blocks ==25039== still reachable: 24 bytes in 2 blocks ==25039== suppressed: 617,914 bytes in 8,236 blocks ==25039== Reachable blocks (those to which a pointer was found) are not shown. ==25039== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25039== ==25039== For lists of detected and suppressed errors, rerun with: -s ==25039== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)