==43959== Memcheck, a memory error detector ==43959== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==43959== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==43959== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacSimulation -malloc_debug -malloc_dump -memory_info ==43959== Parent PID: 24146 ==43959== ==43959== ==43959== FILE DESCRIPTORS: 9 open (3 std) at exit. ==43959== Open file descriptor 12: ==43959== at 0x892707D: pipe (pipe.c:29) ==43959== by 0x1433007D: ??? ==43959== by 0xEE784CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43959== by 0xA022418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43959== by 0x9FBBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43959== by 0x8CB2D38: PetscInitialize (pinit.c:924) ==43959== by 0x82101D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43959== by 0x8210227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43959== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43959== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43959== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43959== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43959== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43959== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43959== ==43959== Open file descriptor 8: /dev/shm/open_mpi.0000 ==43959== at 0x892BA1C: __open_nocancel (open64_nocancel.c:39) ==43959== by 0x88AFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==43959== by 0x8250822: ??? ==43959== by 0x825096F: ??? ==43959== by 0xEF1D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43959== by 0xEF1D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43959== by 0xEED3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==43959== by 0xEE782DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==43959== by 0xA022418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43959== by 0x9FBBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==43959== by 0x8CB2D38: PetscInitialize (pinit.c:924) ==43959== by 0x82101D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==43959== by 0x8210227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==43959== by 0x1202B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==43959== by 0x11A98D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==43959== by 0x11E13C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==43959== by 0x11DFDC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==43959== by 0x11E673: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==43959== by 0x118DB5: main (TestCardiacSimulation.cpp:19) ==43959== ==43959== Open file descriptor 158: ==43959== ==43959== ==43959== Open file descriptor 155: ==43959== ==43959== ==43959== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacSimulation_valgrind.txt ==43959== ==43959== ==43959== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==43959== ==43959== ==43959== ==43959== HEAP SUMMARY: ==43959== in use at exit: 625,893 bytes in 8,260 blocks ==43959== total heap usage: 4,756,896 allocs, 4,748,636 frees, 2,828,621,552 bytes allocated ==43959== ==43959== LEAK SUMMARY: ==43959== definitely lost: 0 bytes in 0 blocks ==43959== indirectly lost: 0 bytes in 0 blocks ==43959== possibly lost: 0 bytes in 0 blocks ==43959== still reachable: 7,156 bytes in 18 blocks ==43959== suppressed: 618,737 bytes in 8,242 blocks ==43959== Reachable blocks (those to which a pointer was found) are not shown. ==43959== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==43959== ==43959== For lists of detected and suppressed errors, rerun with: -s ==43959== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 231 from 34)