==25440== Memcheck, a memory error detector ==25440== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25440== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25440== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==25440== Parent PID: 24059 ==25440== ==25440== ==25440== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25440== Open file descriptor 12: ==25440== at 0xED0E07D: pipe (pipe.c:29) ==25440== by 0x196B507D: ??? ==25440== by 0x13C084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25440== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25440== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25440== by 0xD5CAD38: PetscInitialize (pinit.c:924) ==25440== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25440== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25440== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25440== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25440== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25440== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25440== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25440== by 0x1222F5: main (TestCell.cpp:19) ==25440== ==25440== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25440== at 0xED12A1C: __open_nocancel (open64_nocancel.c:39) ==25440== by 0xEC96BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25440== by 0xE85F822: ??? ==25440== by 0xE85F96F: ??? ==25440== by 0x13CAD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25440== by 0x13CAD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25440== by 0x13C63922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25440== by 0x13C082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25440== by 0xE95D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25440== by 0xE8F6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25440== by 0xD5CAD38: PetscInitialize (pinit.c:924) ==25440== by 0xD49F1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25440== by 0xD49F227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25440== by 0x1291DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25440== by 0x123ECD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25440== by 0x126DAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25440== by 0x126C4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25440== by 0x1272E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25440== by 0x1222F5: main (TestCell.cpp:19) ==25440== ==25440== Open file descriptor 158: ==25440== ==25440== ==25440== Open file descriptor 155: ==25440== ==25440== ==25440== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==25440== ==25440== ==25440== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25440== ==25440== ==25440== ==25440== HEAP SUMMARY: ==25440== in use at exit: 618,423 bytes in 8,236 blocks ==25440== total heap usage: 5,183,520 allocs, 5,175,284 frees, 1,819,191,550 bytes allocated ==25440== ==25440== LEAK SUMMARY: ==25440== definitely lost: 0 bytes in 0 blocks ==25440== indirectly lost: 0 bytes in 0 blocks ==25440== possibly lost: 0 bytes in 0 blocks ==25440== still reachable: 184 bytes in 4 blocks ==25440== suppressed: 618,239 bytes in 8,232 blocks ==25440== Reachable blocks (those to which a pointer was found) are not shown. ==25440== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25440== ==25440== For lists of detected and suppressed errors, rerun with: -s ==25440== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)