==41858== Memcheck, a memory error detector ==41858== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41858== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41858== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeWithJacobian -malloc_debug -malloc_dump -memory_info ==41858== Parent PID: 24138 ==41858== ==41858== ==41858== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41858== Open file descriptor 12: ==41858== at 0x9C6807D: pipe (pipe.c:29) ==41858== by 0x1432F07D: ??? ==41858== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41858== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x8508D38: PetscInitialize (pinit.c:924) ==41858== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41858== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41858== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41858== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41858== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41858== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41858== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41858== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41858== ==41858== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41858== at 0x9C6CA1C: __open_nocancel (open64_nocancel.c:39) ==41858== by 0x9BF0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41858== by 0x979D822: ??? ==41858== by 0x979D96F: ??? ==41858== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41858== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41858== by 0x989B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x9834D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41858== by 0x8508D38: PetscInitialize (pinit.c:924) ==41858== by 0x83DF1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41858== by 0x83DF227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41858== by 0x117769: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==41858== by 0x1133B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41858== by 0x1155A2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41858== by 0x11549E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41858== by 0x115AB1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41858== by 0x111BB5: main (TestCvodeWithJacobian.cpp:18) ==41858== ==41858== Open file descriptor 158: ==41858== ==41858== ==41858== Open file descriptor 155: ==41858== ==41858== ==41858== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeWithJacobian_valgrind.txt ==41858== ==41858== ==41858== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41858== ==41858== ==41858== ==41858== HEAP SUMMARY: ==41858== in use at exit: 618,281 bytes in 8,234 blocks ==41858== total heap usage: 74,028 allocs, 65,794 frees, 1,342,640,290 bytes allocated ==41858== ==41858== LEAK SUMMARY: ==41858== definitely lost: 0 bytes in 0 blocks ==41858== indirectly lost: 0 bytes in 0 blocks ==41858== possibly lost: 0 bytes in 0 blocks ==41858== still reachable: 24 bytes in 2 blocks ==41858== suppressed: 618,257 bytes in 8,232 blocks ==41858== Reachable blocks (those to which a pointer was found) are not shown. ==41858== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41858== ==41858== For lists of detected and suppressed errors, rerun with: -s ==41858== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)