==26577== Memcheck, a memory error detector ==26577== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26577== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26577== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==26577== Parent PID: 24157 ==26577== ==26577== ==26577== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26577== Open file descriptor 12: ==26577== at 0xF8E807D: pipe (pipe.c:29) ==26577== by 0x196B407D: ??? ==26577== by 0x14CBC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26577== by 0x11588418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26577== by 0x11521D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26577== by 0x10218D38: PetscInitialize (pinit.c:924) ==26577== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26577== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26577== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26577== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26577== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26577== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26577== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26577== by 0x133475: main (TestNumericalMethods.cpp:19) ==26577== ==26577== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26577== at 0xF8ECA1C: __open_nocancel (open64_nocancel.c:39) ==26577== by 0xF870BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26577== by 0xF144822: ??? ==26577== by 0xF14496F: ??? ==26577== by 0x14D616DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26577== by 0x14D61938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26577== by 0x14D17922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26577== by 0x14CBC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26577== by 0x11588418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26577== by 0x11521D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26577== by 0x10218D38: PetscInitialize (pinit.c:924) ==26577== by 0xF1041D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26577== by 0xF104227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26577== by 0x13A648: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==26577== by 0x13504D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26577== by 0x137DD4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26577== by 0x137C74: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26577== by 0x13830B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26577== by 0x133475: main (TestNumericalMethods.cpp:19) ==26577== ==26577== Open file descriptor 158: ==26577== ==26577== ==26577== Open file descriptor 155: ==26577== ==26577== ==26577== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==26577== ==26577== ==26577== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26577== ==26577== ==26577== ==26577== HEAP SUMMARY: ==26577== in use at exit: 618,366 bytes in 8,239 blocks ==26577== total heap usage: 69,196 allocs, 60,957 frees, 1,341,834,055 bytes allocated ==26577== ==26577== LEAK SUMMARY: ==26577== definitely lost: 0 bytes in 0 blocks ==26577== indirectly lost: 0 bytes in 0 blocks ==26577== possibly lost: 0 bytes in 0 blocks ==26577== still reachable: 56 bytes in 3 blocks ==26577== suppressed: 618,310 bytes in 8,236 blocks ==26577== Reachable blocks (those to which a pointer was found) are not shown. ==26577== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26577== ==26577== For lists of detected and suppressed errors, rerun with: -s ==26577== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)