==25064== Memcheck, a memory error detector ==25064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25064== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestCvodeAdaptor -malloc_debug -malloc_dump -memory_info ==25064== Parent PID: 24143 ==25064== ==25064== ==25064== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25064== Open file descriptor 12: ==25064== at 0x4F5207D: pipe (pipe.c:29) ==25064== by 0xB1E607D: ??? ==25064== by 0x8CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25064== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25064== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25064== by 0x5308D38: PetscInitialize (pinit.c:924) ==25064== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25064== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25064== by 0x126E96: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25064== by 0x1215DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25064== by 0x1243B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25064== by 0x124254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25064== by 0x1248EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25064== by 0x11F185: main (TestCvodeAdaptor.cpp:19) ==25064== ==25064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25064== at 0x4F56A1C: __open_nocancel (open64_nocancel.c:39) ==25064== by 0x4EDABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25064== by 0x4B7C822: ??? ==25064== by 0x4B7C96F: ??? ==25064== by 0x8D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25064== by 0x8D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25064== by 0x8D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25064== by 0x8CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25064== by 0x6678418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25064== by 0x6611D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25064== by 0x5308D38: PetscInitialize (pinit.c:924) ==25064== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25064== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25064== by 0x126E96: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==25064== by 0x1215DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25064== by 0x1243B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25064== by 0x124254: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25064== by 0x1248EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25064== by 0x11F185: main (TestCvodeAdaptor.cpp:19) ==25064== ==25064== Open file descriptor 158: ==25064== ==25064== ==25064== Open file descriptor 155: ==25064== ==25064== ==25064== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeAdaptor_valgrind.txt ==25064== ==25064== ==25064== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25064== ==25064== ==25064== ==25064== HEAP SUMMARY: ==25064== in use at exit: 617,938 bytes in 8,238 blocks ==25064== total heap usage: 49,834 allocs, 41,596 frees, 1,338,664,352 bytes allocated ==25064== ==25064== LEAK SUMMARY: ==25064== definitely lost: 0 bytes in 0 blocks ==25064== indirectly lost: 0 bytes in 0 blocks ==25064== possibly lost: 0 bytes in 0 blocks ==25064== still reachable: 24 bytes in 2 blocks ==25064== suppressed: 617,914 bytes in 8,236 blocks ==25064== Reachable blocks (those to which a pointer was found) are not shown. ==25064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25064== ==25064== For lists of detected and suppressed errors, rerun with: -s ==25064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)