==25506== Memcheck, a memory error detector ==25506== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25506== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25506== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellCycleModelOdeSolver -malloc_debug -malloc_dump -memory_info ==25506== Parent PID: 24087 ==25506== ==25506== ==25506== FILE DESCRIPTORS: 10 open (3 std) at exit. ==25506== Open file descriptor 12: ==25506== at 0xEF9407D: pipe (pipe.c:29) ==25506== by 0x196B507D: ??? ==25506== by 0x13C594CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25506== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25506== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25506== by 0xD871D38: PetscInitialize (pinit.c:924) ==25506== by 0xD6E31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25506== by 0xD6E3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25506== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25506== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25506== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25506== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25506== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25506== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25506== ==25506== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25506== at 0xEF98A1C: __open_nocancel (open64_nocancel.c:39) ==25506== by 0xEF1CBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25506== by 0xD723822: ??? ==25506== by 0xD72396F: ??? ==25506== by 0x13CFE6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25506== by 0x13CFE938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25506== by 0x13CB4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25506== by 0x13C592DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25506== by 0xEBE1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25506== by 0xEB7AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25506== by 0xD871D38: PetscInitialize (pinit.c:924) ==25506== by 0xD6E31D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25506== by 0xD6E3227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25506== by 0x162DFB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25506== by 0x15D597: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25506== by 0x1604CA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25506== by 0x16036A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25506== by 0x160A01: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25506== by 0x15B575: main (TestCellCycleModelOdeSolver.cpp:19) ==25506== ==25506== Open file descriptor 195: /usr/share/ca-certificates/mozilla/UCA_Global_G2_Root.crt ==25506== ==25506== ==25506== Open file descriptor 158: ==25506== ==25506== ==25506== Open file descriptor 155: ==25506== ==25506== ==25506== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellCycleModelOdeSolver_valgrind.txt ==25506== ==25506== ==25506== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25506== ==25506== ==25506== ==25506== HEAP SUMMARY: ==25506== in use at exit: 618,370 bytes in 8,239 blocks ==25506== total heap usage: 547,400 allocs, 539,161 frees, 1,344,759,687 bytes allocated ==25506== ==25506== LEAK SUMMARY: ==25506== definitely lost: 0 bytes in 0 blocks ==25506== indirectly lost: 0 bytes in 0 blocks ==25506== possibly lost: 0 bytes in 0 blocks ==25506== still reachable: 56 bytes in 3 blocks ==25506== suppressed: 618,314 bytes in 8,236 blocks ==25506== Reachable blocks (those to which a pointer was found) are not shown. ==25506== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25506== ==25506== For lists of detected and suppressed errors, rerun with: -s ==25506== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)