==41893== Memcheck, a memory error detector ==41893== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41893== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41893== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==41893== Parent PID: 24029 ==41893== ==41893== ==41893== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41893== Open file descriptor 12: ==41893== at 0x856F07D: pipe (pipe.c:29) ==41893== by 0x1432F07D: ??? ==41893== by 0xEE294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41893== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41893== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41893== by 0x88FAD38: PetscInitialize (pinit.c:924) ==41893== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41893== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41893== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41893== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41893== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41893== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41893== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41893== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41893== ==41893== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41893== at 0x8573A1C: __open_nocancel (open64_nocancel.c:39) ==41893== by 0x84F7BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41893== by 0x81DB822: ??? ==41893== by 0x81DB96F: ??? ==41893== by 0xEED06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41893== by 0xEED0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41893== by 0xEE86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41893== by 0xEE292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41893== by 0x9C6A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41893== by 0x9C03D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41893== by 0x88FAD38: PetscInitialize (pinit.c:924) ==41893== by 0x819B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41893== by 0x819B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41893== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41893== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41893== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41893== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41893== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41893== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==41893== ==41893== Open file descriptor 158: ==41893== ==41893== ==41893== Open file descriptor 155: ==41893== ==41893== ==41893== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==41893== ==41893== ==41893== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41893== ==41893== ==41893== ==41893== HEAP SUMMARY: ==41893== in use at exit: 618,354 bytes in 8,238 blocks ==41893== total heap usage: 49,005 allocs, 40,767 frees, 1,338,536,250 bytes allocated ==41893== ==41893== LEAK SUMMARY: ==41893== definitely lost: 0 bytes in 0 blocks ==41893== indirectly lost: 0 bytes in 0 blocks ==41893== possibly lost: 0 bytes in 0 blocks ==41893== still reachable: 24 bytes in 2 blocks ==41893== suppressed: 618,330 bytes in 8,236 blocks ==41893== Reachable blocks (those to which a pointer was found) are not shown. ==41893== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41893== ==41893== For lists of detected and suppressed errors, rerun with: -s ==41893== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)