==39915== Memcheck, a memory error detector ==39915== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==39915== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==39915== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==39915== Parent PID: 24054 ==39915== ==39915== ==39915== FILE DESCRIPTORS: 9 open (3 std) at exit. ==39915== Open file descriptor 12: ==39915== at 0x10E2807D: pipe (pipe.c:29) ==39915== by 0x196FB07D: ??? ==39915== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39915== by 0x10649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39915== by 0x105E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39915== by 0xF2D9D38: PetscInitialize (pinit.c:924) ==39915== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39915== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39915== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39915== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39915== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39915== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39915== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39915== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39915== ==39915== Open file descriptor 8: /dev/shm/open_mpi.0000 ==39915== at 0x10E2CA1C: __open_nocancel (open64_nocancel.c:39) ==39915== by 0x10DB0BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==39915== by 0xF186822: ??? ==39915== by 0xF18696F: ??? ==39915== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39915== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39915== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==39915== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==39915== by 0x10649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39915== by 0x105E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==39915== by 0xF2D9D38: PetscInitialize (pinit.c:924) ==39915== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==39915== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==39915== by 0x2258F7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==39915== by 0x21F2AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==39915== by 0x222B60: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==39915== by 0x222A01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==39915== by 0x223097: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==39915== by 0x21BBD5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==39915== ==39915== Open file descriptor 158: ==39915== ==39915== ==39915== Open file descriptor 155: ==39915== ==39915== ==39915== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==39915== ==39915== ==39915== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==39915== ==39915== ==39915== ==39915== HEAP SUMMARY: ==39915== in use at exit: 618,281 bytes in 8,235 blocks ==39915== total heap usage: 8,976,881 allocs, 8,968,646 frees, 2,183,749,940 bytes allocated ==39915== ==39915== LEAK SUMMARY: ==39915== definitely lost: 0 bytes in 0 blocks ==39915== indirectly lost: 0 bytes in 0 blocks ==39915== possibly lost: 0 bytes in 0 blocks ==39915== still reachable: 56 bytes in 3 blocks ==39915== suppressed: 618,225 bytes in 8,232 blocks ==39915== Reachable blocks (those to which a pointer was found) are not shown. ==39915== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==39915== ==39915== For lists of detected and suppressed errors, rerun with: -s ==39915== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)