==41043== Memcheck, a memory error detector ==41043== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41043== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41043== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==41043== Parent PID: 24054 ==41043== ==41043== ==41043== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41043== Open file descriptor 12: ==41043== at 0x1110807D: pipe (pipe.c:29) ==41043== by 0x1B3BE07D: ??? ==41043== by 0x165C14CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41043== by 0x12E8F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41043== by 0x12E28D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41043== by 0x11B1FD38: PetscInitialize (pinit.c:924) ==41043== by 0x10A0B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41043== by 0x10A0B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41043== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41043== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41043== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41043== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41043== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41043== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41043== ==41043== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41043== at 0x1110CA1C: __open_nocancel (open64_nocancel.c:39) ==41043== by 0x11090BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41043== by 0x10A46822: ??? ==41043== by 0x10A4696F: ??? ==41043== by 0x166666DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41043== by 0x16666938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41043== by 0x1661C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41043== by 0x165C12DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41043== by 0x12E8F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41043== by 0x12E28D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41043== by 0x11B1FD38: PetscInitialize (pinit.c:924) ==41043== by 0x10A0B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41043== by 0x10A0B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41043== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41043== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41043== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41043== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41043== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41043== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==41043== ==41043== Open file descriptor 158: ==41043== ==41043== ==41043== Open file descriptor 155: ==41043== ==41043== ==41043== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==41043== ==41043== ==41043== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41043== ==41043== ==41043== ==41043== HEAP SUMMARY: ==41043== in use at exit: 618,377 bytes in 8,236 blocks ==41043== total heap usage: 46,840,630 allocs, 46,832,394 frees, 5,592,631,043 bytes allocated ==41043== ==41043== LEAK SUMMARY: ==41043== definitely lost: 0 bytes in 0 blocks ==41043== indirectly lost: 0 bytes in 0 blocks ==41043== possibly lost: 0 bytes in 0 blocks ==41043== still reachable: 136 bytes in 4 blocks ==41043== suppressed: 618,241 bytes in 8,232 blocks ==41043== Reachable blocks (those to which a pointer was found) are not shown. ==41043== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41043== ==41043== For lists of detected and suppressed errors, rerun with: -s ==41043== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)