==25675== Memcheck, a memory error detector ==25675== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==25675== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==25675== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==25675== Parent PID: 24069 ==25675== ==25675== ==25675== FILE DESCRIPTORS: 9 open (3 std) at exit. ==25675== Open file descriptor 12: ==25675== at 0x1109C07D: pipe (pipe.c:29) ==25675== by 0x196FB07D: ??? ==25675== by 0x14C654CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25675== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0xF611D38: PetscInitialize (pinit.c:924) ==25675== by 0xF4E81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25675== by 0xF4E8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25675== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25675== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25675== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25675== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25675== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25675== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25675== ==25675== Open file descriptor 8: /dev/shm/open_mpi.0000 ==25675== at 0x110A0A1C: __open_nocancel (open64_nocancel.c:39) ==25675== by 0x11024BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==25675== by 0x108A1822: ??? ==25675== by 0x108A196F: ??? ==25675== by 0x14D0A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14D0A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14CC0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==25675== by 0x14C652DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==25675== by 0x109A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0x1093DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==25675== by 0xF611D38: PetscInitialize (pinit.c:924) ==25675== by 0xF4E81D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==25675== by 0xF4E8227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==25675== by 0x1294E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==25675== by 0x1249D3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==25675== by 0x126F4A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==25675== by 0x126E45: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==25675== by 0x127459: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==25675== by 0x1231D5: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==25675== ==25675== Open file descriptor 158: ==25675== ==25675== ==25675== Open file descriptor 155: ==25675== ==25675== ==25675== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==25675== ==25675== ==25675== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==25675== ==25675== ==25675== ==25675== HEAP SUMMARY: ==25675== in use at exit: 618,281 bytes in 8,235 blocks ==25675== total heap usage: 7,864,340 allocs, 7,856,105 frees, 2,188,566,322 bytes allocated ==25675== ==25675== LEAK SUMMARY: ==25675== definitely lost: 0 bytes in 0 blocks ==25675== indirectly lost: 0 bytes in 0 blocks ==25675== possibly lost: 0 bytes in 0 blocks ==25675== still reachable: 56 bytes in 3 blocks ==25675== suppressed: 618,225 bytes in 8,232 blocks ==25675== Reachable blocks (those to which a pointer was found) are not shown. ==25675== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==25675== ==25675== For lists of detected and suppressed errors, rerun with: -s ==25675== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)