==40703== Memcheck, a memory error detector ==40703== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40703== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40703== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulationBoundaryCondition -malloc_debug -malloc_dump -memory_info ==40703== Parent PID: 24109 ==40703== ==40703== ==40703== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40703== Open file descriptor 12: ==40703== at 0x125BB07D: pipe (pipe.c:29) ==40703== by 0x1B37607D: ??? ==40703== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40703== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40703== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40703== by 0x10B53D38: PetscInitialize (pinit.c:924) ==40703== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40703== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40703== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40703== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40703== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40703== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40703== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40703== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==40703== ==40703== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40703== at 0x125BFA1C: __open_nocancel (open64_nocancel.c:39) ==40703== by 0x12543BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40703== by 0x10A00822: ??? ==40703== by 0x10A0096F: ??? ==40703== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40703== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40703== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40703== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40703== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40703== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40703== by 0x10B53D38: PetscInitialize (pinit.c:924) ==40703== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40703== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40703== by 0x14364B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40703== by 0x13C4E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40703== by 0x13F2A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40703== by 0x13F19F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40703== by 0x13F7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40703== by 0x13ACE5: main (TestCryptSimulationBoundaryCondition.cpp:18) ==40703== ==40703== Open file descriptor 158: ==40703== ==40703== ==40703== Open file descriptor 155: ==40703== ==40703== ==40703== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulationBoundaryCondition_valgrind.txt ==40703== ==40703== ==40703== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40703== ==40703== ==40703== ==40703== HEAP SUMMARY: ==40703== in use at exit: 618,450 bytes in 8,240 blocks ==40703== total heap usage: 70,047 allocs, 61,807 frees, 1,343,036,282 bytes allocated ==40703== ==40703== LEAK SUMMARY: ==40703== definitely lost: 0 bytes in 0 blocks ==40703== indirectly lost: 0 bytes in 0 blocks ==40703== possibly lost: 0 bytes in 0 blocks ==40703== still reachable: 136 bytes in 4 blocks ==40703== suppressed: 618,314 bytes in 8,236 blocks ==40703== Reachable blocks (those to which a pointer was found) are not shown. ==40703== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40703== ==40703== For lists of detected and suppressed errors, rerun with: -s ==40703== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)