==41564== Memcheck, a memory error detector ==41564== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==41564== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==41564== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedVsBidomainProblem -malloc_debug -malloc_dump -memory_info ==41564== Parent PID: 24109 ==41564== ==41564== ==41564== FILE DESCRIPTORS: 9 open (3 std) at exit. ==41564== Open file descriptor 12: ==41564== at 0xABFB07D: pipe (pipe.c:29) ==41564== by 0x1433107D: ??? ==41564== by 0xFB384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41564== by 0xC2F6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41564== by 0xC28FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41564== by 0xAF86D38: PetscInitialize (pinit.c:924) ==41564== by 0xA4E21D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41564== by 0xA4E2227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41564== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41564== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41564== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41564== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41564== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41564== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41564== ==41564== Open file descriptor 8: /dev/shm/open_mpi.0000 ==41564== at 0xABFFA1C: __open_nocancel (open64_nocancel.c:39) ==41564== by 0xAB83BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==41564== by 0xA51D822: ??? ==41564== by 0xA51D96F: ??? ==41564== by 0xFBDD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41564== by 0xFBDD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41564== by 0xFB93922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==41564== by 0xFB382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==41564== by 0xC2F6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41564== by 0xC28FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==41564== by 0xAF86D38: PetscInitialize (pinit.c:924) ==41564== by 0xA4E21D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==41564== by 0xA4E2227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==41564== by 0x12E254: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==41564== by 0x128EAD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==41564== by 0x12C1D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==41564== by 0x12C076: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==41564== by 0x12C70D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==41564== by 0x1272D5: main (TestExtendedVsBidomainProblem.cpp:19) ==41564== ==41564== Open file descriptor 158: ==41564== ==41564== ==41564== Open file descriptor 155: ==41564== ==41564== ==41564== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedVsBidomainProblem_valgrind.txt ==41564== ==41564== ==41564== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==41564== ==41564== ==41564== ==41564== HEAP SUMMARY: ==41564== in use at exit: 618,818 bytes in 8,248 blocks ==41564== total heap usage: 466,062 allocs, 457,814 frees, 1,446,193,466 bytes allocated ==41564== ==41564== LEAK SUMMARY: ==41564== definitely lost: 0 bytes in 0 blocks ==41564== indirectly lost: 0 bytes in 0 blocks ==41564== possibly lost: 0 bytes in 0 blocks ==41564== still reachable: 24 bytes in 2 blocks ==41564== suppressed: 618,794 bytes in 8,246 blocks ==41564== Reachable blocks (those to which a pointer was found) are not shown. ==41564== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==41564== ==41564== For lists of detected and suppressed errors, rerun with: -s ==41564== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)