==26248== Memcheck, a memory error detector ==26248== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==26248== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==26248== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==26248== Parent PID: 24109 ==26248== ==26248== ==26248== FILE DESCRIPTORS: 9 open (3 std) at exit. ==26248== Open file descriptor 12: ==26248== at 0x10DA007D: pipe (pipe.c:29) ==26248== by 0x196B607D: ??? ==26248== by 0x14C1E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26248== by 0x105C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26248== by 0x1055AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26248== by 0xF22ED38: PetscInitialize (pinit.c:924) ==26248== by 0xF1051D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26248== by 0xF105227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26248== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26248== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26248== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26248== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26248== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26248== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26248== ==26248== Open file descriptor 8: /dev/shm/open_mpi.0000 ==26248== at 0x10DA4A1C: __open_nocancel (open64_nocancel.c:39) ==26248== by 0x10D28BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==26248== by 0x104BE822: ??? ==26248== by 0x104BE96F: ??? ==26248== by 0x14CC36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26248== by 0x14CC3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26248== by 0x14C79922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==26248== by 0x14C1E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==26248== by 0x105C1418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26248== by 0x1055AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==26248== by 0xF22ED38: PetscInitialize (pinit.c:924) ==26248== by 0xF1051D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==26248== by 0xF105227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==26248== by 0x159CA9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==26248== by 0x1521AD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==26248== by 0x15565A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==26248== by 0x1554FA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==26248== by 0x155B91: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==26248== by 0x1505D5: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==26248== ==26248== Open file descriptor 158: ==26248== ==26248== ==26248== Open file descriptor 155: ==26248== ==26248== ==26248== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==26248== ==26248== ==26248== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==26248== ==26248== ==26248== ==26248== HEAP SUMMARY: ==26248== in use at exit: 618,354 bytes in 8,239 blocks ==26248== total heap usage: 224,635 allocs, 216,396 frees, 1,363,740,357 bytes allocated ==26248== ==26248== LEAK SUMMARY: ==26248== definitely lost: 0 bytes in 0 blocks ==26248== indirectly lost: 0 bytes in 0 blocks ==26248== possibly lost: 0 bytes in 0 blocks ==26248== still reachable: 56 bytes in 3 blocks ==26248== suppressed: 618,298 bytes in 8,236 blocks ==26248== Reachable blocks (those to which a pointer was found) are not shown. ==26248== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==26248== ==26248== For lists of detected and suppressed errors, rerun with: -s ==26248== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)