==40996== Memcheck, a memory error detector ==40996== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40996== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40996== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestPottsBasedCryptSimulation -malloc_debug -malloc_dump -memory_info ==40996== Parent PID: 24109 ==40996== ==40996== ==40996== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40996== Open file descriptor 12: ==40996== at 0x110C207D: pipe (pipe.c:29) ==40996== by 0x1B37607D: ??? ==40996== by 0x165854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40996== by 0x12E49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x12DE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x11AD9D38: PetscInitialize (pinit.c:924) ==40996== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40996== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40996== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40996== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40996== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40996== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40996== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40996== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40996== ==40996== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40996== at 0x110C6A1C: __open_nocancel (open64_nocancel.c:39) ==40996== by 0x1104ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40996== by 0x10A00822: ??? ==40996== by 0x10A0096F: ??? ==40996== by 0x1662A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0x1662A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0x165E0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40996== by 0x165852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40996== by 0x12E49418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x12DE2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40996== by 0x11AD9D38: PetscInitialize (pinit.c:924) ==40996== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40996== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40996== by 0x122076: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==40996== by 0x11D6B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40996== by 0x11FAA6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40996== by 0x11F9A1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40996== by 0x11FFB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40996== by 0x11BEB5: main (TestPottsBasedCryptSimulation.cpp:18) ==40996== ==40996== Open file descriptor 158: ==40996== ==40996== ==40996== Open file descriptor 155: ==40996== ==40996== ==40996== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsBasedCryptSimulation_valgrind.txt ==40996== ==40996== ==40996== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40996== ==40996== ==40996== ==40996== HEAP SUMMARY: ==40996== in use at exit: 618,377 bytes in 8,236 blocks ==40996== total heap usage: 46,840,658 allocs, 46,832,422 frees, 5,592,632,564 bytes allocated ==40996== ==40996== LEAK SUMMARY: ==40996== definitely lost: 0 bytes in 0 blocks ==40996== indirectly lost: 0 bytes in 0 blocks ==40996== possibly lost: 0 bytes in 0 blocks ==40996== still reachable: 136 bytes in 4 blocks ==40996== suppressed: 618,241 bytes in 8,232 blocks ==40996== Reachable blocks (those to which a pointer was found) are not shown. ==40996== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40996== ==40996== For lists of detected and suppressed errors, rerun with: -s ==40996== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)