==40572== Memcheck, a memory error detector ==40572== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40572== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40572== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSimpleCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==40572== Parent PID: 24109 ==40572== ==40572== ==40572== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40572== Open file descriptor 12: ==40572== at 0x1095707D: pipe (pipe.c:29) ==40572== by 0x1B37607D: ??? ==40572== by 0x154C94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40572== by 0x1025F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40572== by 0x101F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40572== by 0xEEEFD38: PetscInitialize (pinit.c:924) ==40572== by 0xED611D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40572== by 0xED61227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40572== by 0x18F219: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40572== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40572== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40572== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40572== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40572== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40572== ==40572== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40572== at 0x1095BA1C: __open_nocancel (open64_nocancel.c:39) ==40572== by 0x108DFBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40572== by 0xED9C822: ??? ==40572== by 0xED9C96F: ??? ==40572== by 0x1556E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40572== by 0x1556E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40572== by 0x15524922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40572== by 0x154C92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40572== by 0x1025F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40572== by 0x101F8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40572== by 0xEEEFD38: PetscInitialize (pinit.c:924) ==40572== by 0xED611D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40572== by 0xED61227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40572== by 0x18F219: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40572== by 0x18756B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40572== by 0x18A860: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40572== by 0x18A700: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40572== by 0x18AD97: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40572== by 0x183E95: main (TestSimpleCellCycleModelsForCrypt.cpp:19) ==40572== ==40572== Open file descriptor 158: ==40572== ==40572== ==40572== Open file descriptor 155: ==40572== ==40572== ==40572== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModelsForCrypt_valgrind.txt ==40572== ==40572== ==40572== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40572== ==40572== ==40572== ==40572== HEAP SUMMARY: ==40572== in use at exit: 618,434 bytes in 8,240 blocks ==40572== total heap usage: 754,741 allocs, 746,501 frees, 1,372,796,429 bytes allocated ==40572== ==40572== LEAK SUMMARY: ==40572== definitely lost: 0 bytes in 0 blocks ==40572== indirectly lost: 0 bytes in 0 blocks ==40572== possibly lost: 0 bytes in 0 blocks ==40572== still reachable: 120 bytes in 4 blocks ==40572== suppressed: 618,314 bytes in 8,236 blocks ==40572== Reachable blocks (those to which a pointer was found) are not shown. ==40572== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40572== ==40572== For lists of detected and suppressed errors, rerun with: -s ==40572== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)