==40597== Memcheck, a memory error detector ==40597== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==40597== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==40597== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestWntConcentration -malloc_debug -malloc_dump -memory_info ==40597== Parent PID: 24109 ==40597== ==40597== ==40597== FILE DESCRIPTORS: 9 open (3 std) at exit. ==40597== Open file descriptor 12: ==40597== at 0x126A207D: pipe (pipe.c:29) ==40597== by 0x1B37607D: ??? ==40597== by 0x164F34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40597== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40597== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40597== by 0x10B53D38: PetscInitialize (pinit.c:924) ==40597== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40597== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40597== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40597== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40597== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40597== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40597== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40597== by 0x13D825: main (TestWntConcentration.cpp:19) ==40597== ==40597== Open file descriptor 8: /dev/shm/open_mpi.0000 ==40597== at 0x126A6A1C: __open_nocancel (open64_nocancel.c:39) ==40597== by 0x1262ABCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==40597== by 0x10A00822: ??? ==40597== by 0x10A0096F: ??? ==40597== by 0x165986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40597== by 0x16598938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40597== by 0x1654E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==40597== by 0x164F32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==40597== by 0x11EC3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40597== by 0x11E5CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==40597== by 0x10B53D38: PetscInitialize (pinit.c:924) ==40597== by 0x109C51D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==40597== by 0x109C5227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==40597== by 0x1449B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==40597== by 0x13F409: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==40597== by 0x14221A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==40597== by 0x1420BA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==40597== by 0x142751: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==40597== by 0x13D825: main (TestWntConcentration.cpp:19) ==40597== ==40597== Open file descriptor 158: ==40597== ==40597== ==40597== Open file descriptor 155: ==40597== ==40597== ==40597== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestWntConcentration_valgrind.txt ==40597== ==40597== ==40597== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==40597== ==40597== ==40597== ==40597== HEAP SUMMARY: ==40597== in use at exit: 618,450 bytes in 8,240 blocks ==40597== total heap usage: 56,679 allocs, 48,439 frees, 1,340,198,392 bytes allocated ==40597== ==40597== LEAK SUMMARY: ==40597== definitely lost: 0 bytes in 0 blocks ==40597== indirectly lost: 0 bytes in 0 blocks ==40597== possibly lost: 0 bytes in 0 blocks ==40597== still reachable: 136 bytes in 4 blocks ==40597== suppressed: 618,314 bytes in 8,236 blocks ==40597== Reachable blocks (those to which a pointer was found) are not shown. ==40597== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==40597== ==40597== For lists of detected and suppressed errors, rerun with: -s ==40597== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)