==37607== Memcheck, a memory error detector ==37607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==37607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==37607== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleTargetAreaModifier -malloc_debug -malloc_dump -memory_info ==37607== Parent PID: 24123 ==37607== ==37607== ==37607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==37607== Open file descriptor 12: ==37607== at 0x10D4107D: pipe (pipe.c:29) ==37607== by 0x196FB07D: ??? ==37607== by 0x14C6C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37607== by 0x10649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37607== by 0x105E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37607== by 0xF2D9D38: PetscInitialize (pinit.c:924) ==37607== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37607== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37607== by 0x139D63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==37607== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37607== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37607== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37607== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37607== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==37607== ==37607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==37607== at 0x10D45A1C: __open_nocancel (open64_nocancel.c:39) ==37607== by 0x10CC9BCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==37607== by 0xF186822: ??? ==37607== by 0xF18696F: ??? ==37607== by 0x14D116DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37607== by 0x14D11938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37607== by 0x14CC7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==37607== by 0x14C6C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==37607== by 0x10649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37607== by 0x105E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==37607== by 0xF2D9D38: PetscInitialize (pinit.c:924) ==37607== by 0xF14B1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==37607== by 0xF14B227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==37607== by 0x139D63: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==37607== by 0x1324DD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==37607== by 0x1357DC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==37607== by 0x13567C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==37607== by 0x135D13: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==37607== by 0x130905: main (TestSimpleTargetAreaModifier.cpp:19) ==37607== ==37607== Open file descriptor 158: ==37607== ==37607== ==37607== Open file descriptor 155: ==37607== ==37607== ==37607== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleTargetAreaModifier_valgrind.txt ==37607== ==37607== ==37607== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==37607== ==37607== ==37607== ==37607== HEAP SUMMARY: ==37607== in use at exit: 618,354 bytes in 8,239 blocks ==37607== total heap usage: 588,697 allocs, 580,458 frees, 1,437,149,959 bytes allocated ==37607== ==37607== LEAK SUMMARY: ==37607== definitely lost: 0 bytes in 0 blocks ==37607== indirectly lost: 0 bytes in 0 blocks ==37607== possibly lost: 0 bytes in 0 blocks ==37607== still reachable: 56 bytes in 3 blocks ==37607== suppressed: 618,298 bytes in 8,236 blocks ==37607== Reachable blocks (those to which a pointer was found) are not shown. ==37607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==37607== ==37607== For lists of detected and suppressed errors, rerun with: -s ==37607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)