==24904== Memcheck, a memory error detector ==24904== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==24904== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==24904== Command: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/ode/test/TestAbstractOdeSystem -malloc_debug -malloc_dump -memory_info ==24904== Parent PID: 24005 ==24904== ==24904== ==24904== FILE DESCRIPTORS: 9 open (3 std) at exit. ==24904== Open file descriptor 12: ==24904== at 0x640707D: pipe (pipe.c:29) ==24904== by 0xB1E707D: ??? ==24904== by 0x8CDE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24904== by 0x5FFA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24904== by 0x5F93D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24904== by 0x4C65D38: PetscInitialize (pinit.c:924) ==24904== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24904== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24904== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24904== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24904== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24904== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24904== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24904== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==24904== ==24904== Open file descriptor 8: /dev/shm/open_mpi.0000 ==24904== at 0x640BA1C: __open_nocancel (open64_nocancel.c:39) ==24904== by 0x638FBCF: shm_open@@GLIBC_2.34 (shm_open.c:40) ==24904== by 0x5EEF822: ??? ==24904== by 0x5EEF96F: ??? ==24904== by 0x8D836DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24904== by 0x8D83938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24904== by 0x8D39922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==24904== by 0x8CDE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==24904== by 0x5FFA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24904== by 0x5F93D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==24904== by 0x4C65D38: PetscInitialize (pinit.c:924) ==24904== by 0x4B3C1D9: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==24904== by 0x4B3C227: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==24904== by 0x137AEF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==24904== by 0x1315E1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==24904== by 0x134746: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==24904== by 0x1345E6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==24904== by 0x134C7D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==24904== by 0x12EE55: main (TestAbstractOdeSystem.cpp:19) ==24904== ==24904== Open file descriptor 158: ==24904== ==24904== ==24904== Open file descriptor 155: ==24904== ==24904== ==24904== Open file descriptor 4: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractOdeSystem_valgrind.txt ==24904== ==24904== ==24904== Open file descriptor 3: /home/runner/work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==24904== ==24904== ==24904== ==24904== HEAP SUMMARY: ==24904== in use at exit: 617,938 bytes in 8,238 blocks ==24904== total heap usage: 45,969 allocs, 37,731 frees, 1,338,348,697 bytes allocated ==24904== ==24904== LEAK SUMMARY: ==24904== definitely lost: 0 bytes in 0 blocks ==24904== indirectly lost: 0 bytes in 0 blocks ==24904== possibly lost: 0 bytes in 0 blocks ==24904== still reachable: 24 bytes in 2 blocks ==24904== suppressed: 617,914 bytes in 8,236 blocks ==24904== Reachable blocks (those to which a pointer was found) are not shown. ==24904== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==24904== ==24904== For lists of detected and suppressed errors, rerun with: -s ==24904== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)